RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SLC35B1P78383 322 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 NDPQ00604 133 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 PSG5Q15238 335 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 LIN54Q6MZP7 749 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 GPR141Q7Z602 305 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 MRAPQ8TCY5 172 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 DDB2Q92466 427 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 SNAPC3Q92966 411 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 OR51J1Q9H342 316 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 KIAA1456Q9P272 454 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 COMMD3Q9UBI1 195 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 ANAPC10Q9UM13 185 aa12.07□□□□□ -0.48
VAPA-201ENST00000340541 LINC00473A8K010 186 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 J3QRK9 145 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 FCN1O00602 326 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 ATP6V0E1O15342 81 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 APOA1P02647 267 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 APOA2P02652 100 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 DUTP33316 252 aaKnown RBP12.06□□□□□ -0.48
VAPA-201ENST00000340541 RORCP51449 518 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 RPL23AP62750 156 aaKnown RBP12.06□□□□□ -0.48
VAPA-201ENST00000340541 TMEM69Q5SWH9 247 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 COMMD1Q8N668 190 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 RNF152Q8N8N0 203 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 CMTM3Q96MX0 182 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 SLC35D1Q9NTN3 355 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 FBXO7Q9Y3I1 522 aa12.06□□□□□ -0.48
VAPA-201ENST00000340541 RBM7Q9Y580 266 aaKnown RBP12.06□□□□□ -0.48
VAPA-201ENST00000340541 MEIS3P1A6NDR6 274 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 G3V318 75 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 IGLV2-23P01705 113 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 IGHG4P01861 327 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 PRB2P02812 416 aaPredicted RBP12.05□□□□□ -0.48
VAPA-201ENST00000340541 FCER2P06734 321 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 PPIFP30405 207 aaKnown RBP12.05□□□□□ -0.48
VAPA-201ENST00000340541 CBX5P45973 191 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 THBS3P49746 956 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 LUMP51884 338 aaPredicted RBP12.05□□□□□ -0.48
VAPA-201ENST00000340541 EIF4EBP1Q13541 118 aaPredicted RBP12.05□□□□□ -0.48
VAPA-201ENST00000340541 C19orf54Q5BKX5 351 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 TEX38Q6PEX7 206 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 C18orf65Q6ZTR6 163 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 ZNF645Q8N7E2 425 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 ACOT12Q8WYK0 555 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 FLYWCH2Q96CP2 140 aaKnown RBP12.05□□□□□ -0.48
VAPA-201ENST00000340541 GON7Q9BXV9 100 aa12.05□□□□□ -0.48
VAPA-201ENST00000340541 HPGDSO60760 199 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 SPDEFO95238 335 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 RPLP1P05386 114 aaKnown RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 CRYGBP07316 175 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 EGR2P11161 476 aaPredicted RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 ELK1P19419 428 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 VDAC1P21796 283 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 CRIP2P52943 208 aaPredicted RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 ARPC4P59998 168 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 RPS16P62249 146 aaKnown RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 CX3CL1P78423 397 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 FOXE3Q13461 319 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 SPCS2Q15005 226 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 TMEM177Q53S58 311 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 KHDC1LQ5JSQ8 128 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 ZNF660Q6AZW8 331 aaPredicted RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 ETV3LQ6ZN32 361 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 LCNL1Q6ZST4 164 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 BVESQ8NE79 360 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 TSNAXQ99598 290 aaKnown RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 PARP11Q9NR21 331 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 TPSG1Q9NRR2 321 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 ZFP57Q9NU63 452 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 AURKAIP1Q9NWT8 199 aaPredicted RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 METTL1Q9UBP6 276 aaKnown RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 RBMX2Q9Y388 322 aaKnown RBP12.04□□□□□ -0.48
VAPA-201ENST00000340541 WSB1Q9Y6I7 421 aa12.04□□□□□ -0.48
VAPA-201ENST00000340541 SRRM4A7MD48 611 aaKnown RBP12.03□□□□□ -0.48
VAPA-201ENST00000340541 SLC25A17O43808 307 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 ELANEP08246 267 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 ZNF182P17025 639 aaPredicted RBP12.03□□□□□ -0.48
VAPA-201ENST00000340541 NAT1P18440 290 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 CD33P20138 364 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 AADACP22760 399 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 PSMB8P28062 276 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 FCGR2CP31995 323 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 RPL30P62888 115 aaKnown RBP12.03□□□□□ -0.48
VAPA-201ENST00000340541 SSBP2P81877 361 aaPredicted RBP12.03□□□□□ -0.48
VAPA-201ENST00000340541 TAGLNQ01995 201 aaKnown RBP12.03□□□□□ -0.48
VAPA-201ENST00000340541 MINDY2Q8NBR6 621 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 OR5AP2Q8NGF4 316 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 MYOZ3Q8TDC0 251 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 ADTRPQ96IZ2 230 aa12.03□□□□□ -0.48
VAPA-201ENST00000340541 TNCP24821 2201 aa12.02□□□□□ -0.48
VAPA-201ENST00000340541 TRAV41A0A0B4J266 112 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 SLC22A5O76082 557 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 DUS4LO95620 317 aaKnown RBP12.02□□□□□ -0.49
VAPA-201ENST00000340541 CA2P00918 260 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 PPYP01298 95 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 IGLV1-40P01703 118 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 OR5H8P0DN80 308 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 PF4V1P10720 104 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 PRSS3P35030 304 aa12.02□□□□□ -0.49
VAPA-201ENST00000340541 LGALS7P47929 136 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms