RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 LRRC30A6NM36 301 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 A8MXE2 369 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SRP19P09132 144 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 TDGF1P3P51864 188 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 EIF2S3LQ2VIR3 472 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 LRRC75BQ2VPJ9 315 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 NCR3LG1Q68D85 454 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 DUX4L9Q6RFH8 374 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 C1orf229Q6ZS94 237 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CLDND2Q8NHS1 167 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 TCTEX1D2Q8WW35 142 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ITLN1Q8WWA0 313 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 PARD6GQ9BYG4 376 aaPredicted RBP10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 MRPL37Q9BZE1 423 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 RPRMQ9NS64 109 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 DIDO1Q9BTC0 2240 aaKnown RBP10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 PLCE1Q9P212 2302 aa10.77□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CLDN14O95500 239 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CLDN1O95832 211 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CRYBA1P05813 215 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 OR8U8P0C7N1 319 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 OR13C7P0DN81 318 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 KLF3P57682 345 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 MZT1Q08AG7 82 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ZNF506Q5JVG8 444 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SPANXN5Q5MJ07 72 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 DPPA3Q6W0C5 159 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ZNF66Q6ZN08 573 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ZNRF1Q8ND25 227 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 FAM222BQ8WU58 562 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SNX22Q96L94 193 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 PBDC1Q9BVG4 233 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 PRELID3BQ9Y3B1 194 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 KLF2Q9Y5W3 355 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 BTBD17A6NE02 478 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 F2RL2O00254 374 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 RAB29O14966 203 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SPRY3O43610 288 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SCAF4O95104 1147 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CRYABP02511 175 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CD55P08174 381 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 FBP1P09467 338 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 DAOP14920 347 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 GATA4P43694 442 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ZNF134P52741 427 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 AKR1C8PQ5T2L2 129 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 VHLLQ6RSH7 139 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 TCF23Q7RTU1 214 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 Q8NA96 180 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ZDHHC16Q969W1 377 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 HIST1H2BAQ96A08 127 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 YPEL4Q96NS1 127 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 PSMG3Q9BT73 122 aaPredicted RBP10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 C20orf24Q9BUV8 137 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 WDR61Q9GZS3 305 aaKnown RBP10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 IFI27L2Q9H2X8 130 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CLN8Q9UBY8 286 aa10.76□□□□□ -0.69
CDK5RAP1-201ENST00000339269 H7C2Y5 167 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 MGST3O14880 152 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SLC31A2O15432 143 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 IFNA5P01569 189 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CRYAAP02489 173 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 PRB1P04280 392 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ADH4P08319 380 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SNRNP70P08621 437 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 DUTP33316 252 aaKnown RBP10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CATR1Q13166 79 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 LTC4SQ16873 150 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 AARDQ4LEZ3 155 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 MORN2Q502X0 79 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 TRAT1Q6PIZ9 186 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 TGIF2LYQ8IUE0 185 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SFT2D1Q8WV19 159 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 NINJ1Q92982 152 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 PLPPR2Q96GM1 343 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SMDT1Q9H4I9 107 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CFAP46Q8IYW2 2715 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 DSCAMO60469 2012 aa10.75□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SPINT2O43291 252 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 ZG16O60844 167 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 IGKV1D-33P01593 117 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 IGKV1-33P01594 117 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 IGHV1-46P01743 117 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 FOLR2P14207 255 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 SLC38A11Q08AI6 406 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 C17orf58Q2M2W7 97 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 AKIRIN2Q53H80 203 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 TCTEX1D1Q8N7M0 179 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 MBD3L1Q8WWY6 194 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 HSD17B10Q99714 261 aaKnown RBP10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 RPS10P5Q9NQ39 176 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 JPT1Q9UK76 154 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 RP1L1Q8IWN7 2480 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 A0A0G2JNJ9 132 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 LOC102723971A0A1B0GUV8 181 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 CD40P25942 277 aa10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 HABP2Q14520 560 aaPredicted RBP10.74□□□□□ -0.69
CDK5RAP1-201ENST00000339269 KRTCAP3Q53RY4 240 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms