RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 PSG7Q13046 419 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 HERPUD1Q15011 391 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 SLC25A53Q5H9E4 307 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 RNFT1Q5M7Z0 435 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 ZNF610Q8N9Z0 462 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 REPIN1Q9BWE0 567 aaKnown RBP6.98□□□□□ -1.29
HPS4-201ENST00000336873 RIMS4Q9H426 269 aaPredicted RBP6.98□□□□□ -1.29
HPS4-201ENST00000336873 TRAV24A0A0B4J272 114 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 GNB1P62873 340 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 FOXO1Q12778 655 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 PLGLAQ15195 96 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 DMRTC2Q8IXT2 367 aaPredicted RBP6.98□□□□□ -1.29
HPS4-201ENST00000336873 COMMD1Q8N668 190 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 WDYHV1Q96HA8 205 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 SMIM8Q96KF7 97 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 TPPP3Q9BW30 176 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 SAMD10Q9BYL1 202 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 HIPK2Q9H2X6 1198 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 RNF122Q9H9V4 155 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 PLA2G2EQ9NZK7 142 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 FUT9Q9Y231 359 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 CPAMD8Q8IZJ3 1885 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 ABCA2Q9BZC7 2435 aa6.98□□□□□ -1.29
HPS4-201ENST00000336873 TMEM30CPA0ZSE6 113 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 J3QT63 122 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 AP4M1O00189 453 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 PSPNO60542 156 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 LHX2P50458 406 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 TAS2R30P59541 319 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 FOXF2Q12947 444 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 RNPS1Q15287 305 aaKnown RBP6.97□□□□□ -1.29
HPS4-201ENST00000336873 RPL39P5Q59GN2 51 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 FAM78BQ5VT40 261 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 ZNF705AQ6ZN79 300 aaPredicted RBP6.97□□□□□ -1.29
HPS4-201ENST00000336873 FAM122AQ96E09 287 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 S1PR3Q99500 378 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 METRNQ9UJH8 293 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 PROCRQ9UNN8 238 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 C17orf98A8MV24 154 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 FGF16O43320 207 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 GATA2P23769 480 aaPredicted RBP6.97□□□□□ -1.29
HPS4-201ENST00000336873 DDTP30046 118 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 CLDN18P56856 261 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 ZFP36L1Q07352 338 aaKnown RBP6.97□□□□□ -1.29
HPS4-201ENST00000336873 BTNL8Q6UX41 500 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 PIEZO1Q92508 2521 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 IGKV1-6A0A0C4DH72 117 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 A0A1B0GWJ7 208 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 CLN5O75503 358 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 OR10J4P0C629 311 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 HLA-GP17693 338 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 NTF3P20783 257 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 CCL1P22362 96 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 MDH2P40926 338 aaKnown RBP6.97□□□□□ -1.29
HPS4-201ENST00000336873 HIST3H3Q16695 136 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 DNM1P46Q6ZS02 220 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 REC114Q7Z4M0 266 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 C15orf54Q8N8G6 183 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 DYNLRB1Q9NP97 96 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 LYRM2Q9NU23 88 aaPredicted RBP6.97□□□□□ -1.29
HPS4-201ENST00000336873 KALRNO60229 2985 aa6.97□□□□□ -1.29
HPS4-201ENST00000336873 OR5B21A6NL26 309 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 H3BTX0 84 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 CLDN34H7C241 214 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 TCF21O43680 179 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 CLDN14O95500 239 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 OR5G3P0C626 314 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 COX5BP10606 129 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 CD33P20138 364 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 HTD2P86397 168 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 HABP2Q14520 560 aaPredicted RBP6.96□□□□□ -1.29
HPS4-201ENST00000336873 PPP1R35Q8TAP8 253 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 IL22RA2Q969J5 263 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 RAB40CQ96S21 281 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 GGACTQ9BVM4 153 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.96□□□□□ -1.29
HPS4-201ENST00000336873 MPC1Q9Y5U8 109 aa6.96□□□□□ -1.29
HPS4-201ENST00000336873 LOC102723996A0A087X1L8 192 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 GAPDHP04406 335 aaKnown RBP6.96□□□□□ -1.3
HPS4-201ENST00000336873 COX5AP20674 150 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 HOXA6P31267 233 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 B3GALT5-AS1P59052 145 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 RPS23P62266 143 aaKnown RBP6.96□□□□□ -1.3
HPS4-201ENST00000336873 TFF3Q07654 80 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 KCNMB1Q16558 191 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 RIPPLY2Q5TAB7 128 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 ASPHD1Q5U4P2 390 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 DHRS7BQ6IAN0 325 aaPredicted RBP6.96□□□□□ -1.3
HPS4-201ENST00000336873 NHLRC2Q8NBF2 726 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 MRPL30Q8TCC3 161 aaKnown RBP6.96□□□□□ -1.3
HPS4-201ENST00000336873 POM121L2Q96KW2 1035 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 PCGF1Q9BSM1 259 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 SORL1Q92673 2214 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 CHD3Q12873 2000 aaKnown RBP6.96□□□□□ -1.3
HPS4-201ENST00000336873 PIGBOS1A0A0B4J2F0 54 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 COLCA2A8K830 154 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 RNF212BA8MTL3 300 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 C12orf77C9JDV5 145 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 NDUFB4O95168 129 aa6.96□□□□□ -1.3
HPS4-201ENST00000336873 PMS2P11Q13670 270 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms