RNA–Protein interactions for RNA: ENST00000332682.8

TRIM49B-201, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 1,534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-201ENST00000332682 H2BFSP57053 126 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 DIAPH2-AS1Q14236 149 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 TMEM249Q2WGJ8 235 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF585BQ52M93 769 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 OR2B11Q5JQS5 317 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 LDLRAD2Q5SZI1 272 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 DCAF12L2Q5VW00 463 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 AKAP14Q86UN6 197 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 TCTEX1D1Q8N7M0 179 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF383Q8NA42 475 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 OR5M8Q8NGP6 311 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 C18orf12Q96KH6 178 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 MRPL20Q9BYC9 149 aaKnown RBP9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 HIF1ANQ9NWT6 349 aa9.81□□□□□ -0.84
TRIM49B-201ENST00000332682 ZANQ9Y493 2812 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 LY6LH3BQJ8 138 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 CCSO14618 274 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 CCNKO75909 580 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 IGKV1-39P01597 117 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 IGKV1D-39P04432 117 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 ARG1P05089 322 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 CT45A6P0DMU7 189 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 CT45A5P0DMU8 189 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 CT45A7P0DMV0 189 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 IGHV4-31P0DP07 118 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 REG1BP48304 166 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 THBS3P49746 956 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 CD83Q01151 205 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 TMEM268Q5VZI3 342 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 PDZD9Q8IXQ8 264 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 SPAG16Q8N0X2 631 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 SLC35G3Q8N808 338 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 IL22RA2Q969J5 263 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 ADTRPQ96IZ2 230 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 ST6GAL2Q96JF0 529 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 RAB18Q9NP72 206 aa9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 FAM212BQ9NTI7 297 aaPredicted RBP9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 AMMECR1Q9Y4X0 333 aaPredicted RBP9.8□□□□□ -0.84
TRIM49B-201ENST00000332682 SIX6O95475 246 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 HOXB5P09067 269 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 GATA3P23771 443 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 HTR1DP28221 377 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 UBE2E1P51965 193 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 LYZL2Q7Z4W2 148 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 TGIF2LXQ8IUE1 241 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF695Q8IW36 515 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 SELENOHQ8IZQ5 122 aaKnown RBP9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 RBPMSQ93062 196 aaKnown RBP9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 LHX4Q969G2 390 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF436Q9C0F3 470 aaPredicted RBP9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 RANGRFQ9HD47 186 aaPredicted RBP9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 PRELID3BQ9Y3B1 194 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 AUP1Q9Y679 476 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 NOTCH2Q04721 2471 aa9.79□□□□□ -0.84
TRIM49B-201ENST00000332682 FLNAP21333 2647 aaKnown RBP9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 A0A1W2PRD5 423 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 A0A1W2PRF3 423 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 A0A1W2PRM7 423 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 MPTX1A8MV57 137 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 RBFOX2O43251 390 aaKnown RBP eCLIP9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 FCGR3BO75015 233 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 S1PR2O95136 353 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 RPA2P15927 270 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 KIR2DS2P43631 304 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 LPAR6P43657 344 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 GGNBP1Q5YKI7 109 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 LHFPL4Q7Z7J7 247 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 CIARTQ8N365 385 aaPredicted RBP9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 OR5AN1Q8NGI8 311 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 CD300LFQ8TDQ1 290 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 RPEQ96AT9 228 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 FYTTD1Q96QD9 318 aaKnown RBP9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 NABP2Q9BQ15 211 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 C7orf69Q9H7B7 122 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 ABCA1O95477 2261 aa9.78□□□□□ -0.84
TRIM49B-201ENST00000332682 CENPVL3A0A0U1RRI6 287 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 DUXBA0A1W2PPF3 345 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 FAM25EA8MYX2 175 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 LEUTXA8MZ59 168 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 H0YJW9 148 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 OR2A4O95047 310 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 TGFAP01135 160 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 GIPP09681 153 aaPredicted RBP9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 GZMKP49863 264 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 ZNF816Q0VGE8 651 aaPredicted RBP9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 NMSQ5H8A3 153 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 TPTE2P1Q5T6R2 138 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 OR4S2Q8NH73 311 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 WDR89Q96FK6 387 aaPredicted RBP9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 OR2A7Q96R45 310 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 DPM3Q9P2X0 92 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 TMED3Q9Y3Q3 217 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 MYO9AB2RTY4 2548 aa9.77□□□□□ -0.84
TRIM49B-201ENST00000332682 TRAV40A0A0B4J280 105 aa9.77□□□□□ -0.85
TRIM49B-201ENST00000332682 PIGBOS1A0A0B4J2F0 54 aa9.77□□□□□ -0.85
TRIM49B-201ENST00000332682 IGHV1-3A0A0C4DH29 117 aa9.77□□□□□ -0.85
TRIM49B-201ENST00000332682 A0A1W2PPI3 338 aa9.77□□□□□ -0.85
TRIM49B-201ENST00000332682 C5orf51A6NDU8 294 aa9.77□□□□□ -0.85
TRIM49B-201ENST00000332682 TXNL1O43396 289 aa9.77□□□□□ -0.85
TRIM49B-201ENST00000332682 IFNA21P01568 189 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms