RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 TBL2Q9Y4P3 447 aaKnown RBP8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 MINOS1-NBL1R4GNA1 71 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 FLNBO75369 2602 aaKnown RBP8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 HMX3A6NHT5 357 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 LEUTXA8MZ59 168 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 CT45A6P0DMU7 189 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 CT45A5P0DMU8 189 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 CT45A7P0DMV0 189 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 CEACAM3P40198 252 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 ZNF816Q0VGE8 651 aaPredicted RBP8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 TPTE2P1Q5T6R2 138 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 TGIF2LXQ8IUE1 241 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 PDZD9Q8IXQ8 264 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 LGI3Q8N145 548 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 CIARTQ8N365 385 aaPredicted RBP8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 LRTM2Q8N967 370 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 ZNF383Q8NA42 475 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 IL22RA2Q969J5 263 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 TMEM56Q96MV1 263 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 DPM3Q9P2X0 92 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 PRELID3BQ9Y3B1 194 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 TMEM56-RWDD3S4R434 201 aa8.31□□□□□ -1.08
VIPAS39-201ENST00000327028 MYO9AB2RTY4 2548 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 CENPVL3A0A0U1RRI6 287 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 RBFOX2O43251 390 aaKnown RBP eCLIP8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 SERPINE2P07093 398 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 SULT1A3P0DMM9 295 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 SULT1A4P0DMN0 295 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 REG1BP48304 166 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 LINC00205P59089 165 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 DIAPH2-AS1Q14236 149 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 FCN2Q15485 313 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 MIDNQ504T8 468 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 LIN54Q6MZP7 749 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 SPAG16Q8N0X2 631 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 LHFPL5Q8TAF8 219 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 CD300LFQ8TDQ1 290 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 RPEQ96AT9 228 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 ITGB1BP2Q9UKP3 347 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 CDS2O95674 445 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 GAPDHP04406 335 aaKnown RBP8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 BRWD1-AS2P59051 145 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 TAGLNQ01995 201 aaKnown RBP8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 ZNF585BQ52M93 769 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 OR2B11Q5JQS5 317 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 LDLRAD2Q5SZI1 272 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 UXS1Q8NBZ7 420 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 NABP2Q9BQ15 211 aa8.3□□□□□ -1.08
VIPAS39-201ENST00000327028 AKAP9Q99996 3911 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 ZANQ9Y493 2812 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 TRAV40A0A0B4J280 105 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 PIGBOS1A0A0B4J2F0 54 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 IGHV1-69DA0A0B4J2H0 117 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 A0A1W2PRD5 423 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 A0A1W2PRF3 423 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 A0A1W2PRM7 423 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 SMAD7O15105 426 aaKnown RBP8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 NPFFO15130 113 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 IGHV1-69P01742 117 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 RPA2P15927 270 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 LGALS4P56470 323 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 TMEM268Q5VZI3 342 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 LHFPL4Q7Z7J7 247 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 SELENOHQ8IZQ5 122 aaKnown RBP8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 OR11H7Q8NGC8 314 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 OR5AN1Q8NGI8 311 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 RBPMSQ93062 196 aaKnown RBP8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 C18orf12Q96KH6 178 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 RAB18Q9NP72 206 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 MGAT4CQ9UBM8 478 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 IGHV1-3A0A0C4DH29 117 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 DUXBA0A1W2PPF3 345 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 OOSP1A8MZH6 123 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 H0YJW9 148 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 GOSR2O14653 212 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 RAMP3O60896 148 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 FCGR3BO75015 233 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 APOA2P02652 100 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 HLA-GP17693 338 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 SAA4P35542 130 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 LPAR6P43657 344 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 RTL8BQ17RB0 113 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 C2orf68Q2NKX9 166 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 ZNF695Q8IW36 515 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 OR4S2Q8NH73 311 aa8.29□□□□□ -1.08
VIPAS39-201ENST00000327028 A0A1W2PPI3 338 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 A8MV72 311 aaPredicted RBP8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 S1PR2O95136 353 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 RRASP10301 218 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 EPHA1P21709 976 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 GPR157Q5UAW9 335 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 DHRS7BQ6IAN0 325 aaPredicted RBP8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 OR8H3Q8N146 312 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 SLC35G3Q8N808 338 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 PLEKHA2Q9HB19 425 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 SLC35D1Q9NTN3 355 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 COMMD9Q9P000 198 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 ABCA1O95477 2261 aa8.28□□□□□ -1.08
VIPAS39-201ENST00000327028 AVPP01185 164 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms