RNA–Protein interactions for RNA: ENST00000298130.4

SPTSSA-201, Transcript of serine palmitoyltransferase small subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSA, Length 2,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSA-201ENST00000298130 RP1L1Q8IWN7 2480 aaPredicted RBP20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 PTBP3O95758 552 aaKnown RBP20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 GZMHP20718 246 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 PNRC1Q12796 327 aaPredicted RBP20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 Q3ZCU0 254 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 TREM2Q9NZC2 230 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 DMRT1Q9Y5R6 373 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 TMEM30CPA0ZSE6 113 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 RND2P52198 227 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 C11orf53Q8IXP5 236 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 OR13A1Q8NGR1 328 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 DTD1Q8TEA8 209 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 TRIB1Q96RU8 372 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 HSPB7Q9UBY9 170 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 PSG11Q9UQ72 335 aa20.42■□□□□ 0.86
SPTSSA-201ENST00000298130 C21orf140B9A014 251 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 PRSS8Q16651 343 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 DBX2Q6ZNG2 339 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 Q8IYB0 196 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 OR4X1Q8NH49 305 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 S100PBPQ96BU1 408 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 PARLQ9H300 379 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 PAGE4O60829 102 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 CRYAAP02489 173 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 MRPL49Q13405 166 aaKnown RBP20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 NINJ1Q92982 152 aa20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 PINX1Q96BK5 328 aaKnown RBP20.41■□□□□ 0.86
SPTSSA-201ENST00000298130 RPL23P62829 140 aaKnown RBP20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 TMEM241Q24JQ0 296 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 UNQ6494/PRO21346Q6UXR6 183 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 VKORC1L1Q8N0U8 176 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 PRDM13Q9H4Q3 707 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 EP300Q09472 2414 aaPredicted RBP20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 C1QTNF9BB2RNN3 333 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 SOX15O60248 233 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 IFNA1P01562 189 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 CD59P13987 128 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 UBE2G2P60604 165 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 OR51G1Q8NGK1 321 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 RAB24Q969Q5 203 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 ZMAT5Q9UDW3 170 aaKnown RBP20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 BSXQ3C1V8 233 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 OR10P1Q8NGE3 313 aa20.4■□□□□ 0.86
SPTSSA-201ENST00000298130 A0A1W2PPQ1 181 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 PHOX2AO14813 284 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 FIP1L1Q6UN15 594 aaKnown RBP20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 H2BFWTQ7Z2G1 175 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 P2RX4Q99571 388 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 PCGF1Q9BSM1 259 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 CTNNBIP1Q9NSA3 81 aaPredicted RBP20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 NAT8Q9UHE5 227 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 PMS2P5A8MQ11 134 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 COL10A1Q03692 680 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 VWA1Q6PCB0 445 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 PACRGQ96M98 296 aaPredicted RBP20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 TMEM204Q9BSN7 226 aa20.39■□□□□ 0.85
SPTSSA-201ENST00000298130 RNF212BA8MTL3 300 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 PSMB3P49720 205 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 HES3Q5TGS1 186 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 PCNX2A6NKB5 2137 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 HEATR1Q9H583 2144 aaKnown RBP20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 TRAV38-1A0A0B4J264 116 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 WNT2P09544 360 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 P2RY6Q15077 328 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 MSMO1Q15800 293 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 HIST1H2BLQ99880 126 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 QTRT1Q9BXR0 403 aaKnown RBP20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 NPCDR1Q9BY65 106 aa20.38■□□□□ 0.85
SPTSSA-201ENST00000298130 OPN1MWP04001 364 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 OPN1MW2P0DN77 364 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 OPN1MW3P0DN78 364 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 SOX8P57073 446 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 OR10A7Q8NGE5 316 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 TMEM147Q9BVK8 224 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 SMCO3A2RU48 225 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 IQCF6A8MYZ5 107 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 OR13D1Q8NGV5 346 aa20.37■□□□□ 0.85
SPTSSA-201ENST00000298130 PGPEP1LA6NFU8 196 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 CDX4O14627 284 aaPredicted RBP20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 TIMM8AO60220 97 aaPredicted RBP20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 KBTBD11O94819 623 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 GALR1P47211 349 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 SDSLQ96GA7 329 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 TMEM242Q9NWH2 141 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 OOEPA6NGQ2 149 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 ZNF729A6NN14 1252 aaPredicted RBP20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 P0C879 139 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 CHRNA7P36544 502 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 EDDM3BP56851 147 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 TGFBR3Q03167 851 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 GABRA6Q16445 453 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 WDR82Q6UXN9 313 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 CYP2G1PQ6ZSU1 146 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 FER1L6-AS2Q96M78 137 aa20.36■□□□□ 0.85
SPTSSA-201ENST00000298130 TRBV24-1A0A075B6N3 115 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 PIGBOS1A0A0B4J2F0 54 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 CTXND1A0A1B0GTU2 59 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 H7BYZ3 331 aa20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 PFN1P07737 140 aaKnown RBP20.35■□□□□ 0.85
SPTSSA-201ENST00000298130 NPPCP23582 126 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms