RNA–Protein interactions for RNA: ENST00000222120.7

RAB3D-201, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3D, Length 4,273 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-201ENST00000222120 TGIF2-C20orf24A0A0A6YYL0 155 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 MKRN2OSH3BPM6 223 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 WDR25Q64LD2 544 aaPredicted RBP11.49□□□□□ -0.57
RAB3D-201ENST00000222120 OR4D5Q8NGN0 318 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 ITLN1Q8WWA0 313 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM56Q96MV1 263 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 SAMD10Q9BYL1 202 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 COMMD5Q9GZQ3 224 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 VAX2Q9UIW0 290 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 MRPS18CQ9Y3D5 142 aaKnown RBP11.49□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM56-RWDD3S4R434 201 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 RPS23P62266 143 aaKnown RBP11.49□□□□□ -0.57
RAB3D-201ENST00000222120 KHDC3LQ587J8 217 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 H1FOOQ8IZA3 346 aaPredicted RBP11.49□□□□□ -0.57
RAB3D-201ENST00000222120 METTL1Q9UBP6 276 aaKnown RBP11.49□□□□□ -0.57
RAB3D-201ENST00000222120 NKX6-3A6NJ46 265 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 ZNF891A8MT65 544 aaPredicted RBP11.49□□□□□ -0.57
RAB3D-201ENST00000222120 C17orf98A8MV24 154 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 RAMP3O60896 148 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 REG1BP48304 166 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 SSTP61278 116 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 MRPS11P82912 194 aaKnown RBP11.49□□□□□ -0.57
RAB3D-201ENST00000222120 TNFRSF9Q07011 255 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 Q6ZT83 130 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 C9orf106Q8NAJ2 232 aa11.49□□□□□ -0.57
RAB3D-201ENST00000222120 INTS1Q8N201 2190 aaKnown RBP11.48□□□□□ -0.57
RAB3D-201ENST00000222120 A0A0G2JRQ6 117 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 FAM53AQ6NSI3 398 aaPredicted RBP11.48□□□□□ -0.57
RAB3D-201ENST00000222120 PACRGQ96M98 296 aaPredicted RBP11.48□□□□□ -0.57
RAB3D-201ENST00000222120 A0A1B0GV90 55 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 DEFA4P12838 97 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 GZMHP20718 246 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 PAX6P26367 422 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 NRN1LQ496H8 165 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 CCL13Q99616 98 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 PSPNO60542 156 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 NAPSAO96009 420 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 ZNF883P0CG24 379 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 FOXF2Q12947 444 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 MRGPRGQ86SM5 289 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
RAB3D-201ENST00000222120 OR13A1Q8NGR1 328 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 RNF138Q8WVD3 245 aa11.48□□□□□ -0.57
RAB3D-201ENST00000222120 TRAV38-1A0A0B4J264 116 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 IGKV1-6A0A0C4DH72 117 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 CXorf65A6NEN9 183 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 TMEM210A6NLX4 147 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 C11orf94C9JXX5 98 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 APOA2P02652 100 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 GALR1P47211 349 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 CASP6P55212 293 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 ID3Q02535 119 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 GABRA6Q16445 453 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 GFRALQ6UXV0 394 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 SPSB4Q96A44 273 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 RCC1LQ96I51 464 aaKnown RBP11.47□□□□□ -0.57
RAB3D-201ENST00000222120 PRR33A8MZF0 331 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 APELAP0DMC3 54 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 GNB1P62873 340 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 ZNF645Q8N7E2 425 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 ODAMA1E959 279 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 MARCH11A6NNE9 402 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 COLCA2A8K830 154 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 CD5P06127 495 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 OR5G3P0C626 314 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 HOXB1P14653 301 aaPredicted RBP11.47□□□□□ -0.57
RAB3D-201ENST00000222120 ZNF90Q03938 601 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 RBMXL3Q8N7X1 1067 aaKnown RBP11.47□□□□□ -0.57
RAB3D-201ENST00000222120 EGLN1Q9GZT9 426 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 SH2D2AQ9NP31 389 aa11.47□□□□□ -0.57
RAB3D-201ENST00000222120 TRGV8A0A0C4DH27 118 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 KIAA1324LA8MWY0 1029 aaPredicted RBP11.46□□□□□ -0.57
RAB3D-201ENST00000222120 F6UZH7 168 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 FOXC1Q12948 553 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 RTL8BQ17RB0 113 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 RPL39P5Q59GN2 51 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 ABHD12Q8N2K0 398 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 ANAPC10Q9UM13 185 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 IGLV3-1P01715 115 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 RNF224P0DH78 156 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 Q6ZRM9 215 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 LRTM2Q8N967 370 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 OTOGLQ3ZCN5 2332 aa11.46□□□□□ -0.57
RAB3D-201ENST00000222120 GALR2O43603 387 aaPredicted RBP11.46□□□□□ -0.58
RAB3D-201ENST00000222120 NDUFS6O75380 124 aaKnown RBP11.46□□□□□ -0.58
RAB3D-201ENST00000222120 FAM78BQ5VT40 261 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 STUMQ69YW2 141 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 ZNF324BQ6AW86 544 aaPredicted RBP11.46□□□□□ -0.58
RAB3D-201ENST00000222120 NEIL1Q96FI4 390 aaPredicted RBP11.46□□□□□ -0.58
RAB3D-201ENST00000222120 HSD17B10Q99714 261 aaKnown RBP11.46□□□□□ -0.58
RAB3D-201ENST00000222120 K7N7A8 449 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 CDX4O14627 284 aaPredicted RBP11.46□□□□□ -0.58
RAB3D-201ENST00000222120 GYPAP02724 150 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 SLC35E3Q7Z769 313 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 RAB24Q969Q5 203 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 LOXL4Q96JB6 756 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 OR6C3Q9NZP0 311 aa11.46□□□□□ -0.58
RAB3D-201ENST00000222120 DMRT1Q9Y5R6 373 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms