RNA–Protein interactions for RNA: ENSMUST00000061628.6

Pcdh20-201, Transcript of Protocadherin-20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh20, Length 5,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20-201ENSMUST00000061628 Zfp7Q3TFZ4 685 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Vmn1r63Q9EPT1 300 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Dctn6Q9WUB4 190 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 SktA2AQ25 1946 aaKnown RBP13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Dll3O88516 592 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 P01878 344 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fcgr1P26151 404 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 BC147527Q3V185 167 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Wfdc8Q4KUS1 273 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 RflnbQ5SVD0 216 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Ewsr1Q61545 655 aaKnown RBP13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr1342Q8VFY3 315 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Gm10778A0A087WNP5 499 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Gm21778A0A087WNP8 232 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Igkv6-20A0A140T8P2 115 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Dgat2l6A2ADU8 337 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Wdfy1E9Q4P1 410 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Evx1P23683 416 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Dbx1P52950 335 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Hist1h3aP68433 136 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Sec14l3Q5SQ27 401 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr205Q7TS37 305 aa13.08□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Trav5-1A0A075B5Z7 114 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Trav12n-2A0A075B626 113 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Birc7A2AWP0 285 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Tmem108Q8BHE4 574 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Cdadc1Q8BMD5 523 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 SrrdQ8K2M3 249 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr303Q8VFP0 319 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr943Q9EQ92 314 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Tnfsf14Q9QYH9 239 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Mast2Q60592 1734 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Ighv6-5A0A0A6YWS9 119 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr194L7N1Y8 306 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fpr2O88536 351 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Lhfpl5Q4KL25 219 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Taar5Q5QD14 337 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Spcs3Q6ZWQ7 180 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Coro2aQ8C0P5 524 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr181Q8VGQ7 317 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Hdhd3Q9CYW4 251 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Adam6aB2RSY5 754 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fcn2O70497 314 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Slc39a7Q31125 476 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Slc25a31Q3V132 320 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr129Q8VEY1 330 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Baz2bA2AUY4 2123 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Zdhhc22A0PK84 263 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fndc10A2A9Q0 223 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Zfp493E9Q1L8 384 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Ifna2P01573 190 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Mfsd4b3Q3UN21 355 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 NinQ61043 2035 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr1239Q8VGM8 305 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Aurkaip1Q9DCJ7 200 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr157Q9QZ20 318 aa13.07□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Gm609E9Q573 300 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Gm16519F8VQK7 162 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 CckarO08786 436 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Sf3a2Q62203 475 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 TxnipQ8BG60 397 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Vmn1r202Q8R259 302 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Prb1Q91X93 504 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Htra3Q9D236 459 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Hoxb3P09026 433 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Btg2Q04211 158 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Obox7Q4KL20 218 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Taar3Q5QD16 343 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Sh3bgrl2Q8BG73 107 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Flrt3Q8BGT1 649 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Kbtbd11Q8BNW9 633 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Henmt1Q8CAE2 395 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Znf768Q8R0T2 568 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fyttd1Q91Z49 317 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Cldn15Q9Z0S5 227 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Scgb1b15A0A087WP50 93 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Gm2663F6R7E8 247 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Olfr624F8VQI7 308 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Susd5G3UW60 619 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Espl1P60330 2118 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Hnrnpa3Q8BG05 379 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Cmc2Q8K199 79 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 1810009J06RikQ9CPN7 247 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Srxn1Q9D975 136 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fhl5Q9WTX7 284 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Actl6aQ9Z2N8 429 aaKnown RBP13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Fam98cE9PYD1 344 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Klk1b3P00756 261 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 P01809 118 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 VhlP40338 181 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Cd7P50283 210 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Cln5Q3UMW8 341 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 SowahbQ8BZW2 760 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 ManbalQ9D8X0 85 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Lypd2Q9DD23 127 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Plekhb1Q9QYE9 243 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Rsg1A2A825 258 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Gm436B1AVU6 407 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Ceacam1P31809 521 aa13.06□□□□□ -0.32
Pcdh20-201ENSMUST00000061628 Klk1b26P36369 261 aa13.06□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 55 ms