RNA–Protein interactions for RNA: ENSMUST00000028728.5

Ubr1-201, Transcript of E3 ubiquitin-protein ligase UBR1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubr1, Length 7,768 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1-201ENSMUST00000028728 DeddQ9Z1L3 318 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Nup205A0A0J9YUD5 2061 aaKnown RBP9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Col4a1P02463 1669 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r34G3XA52 309 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fcgr3P08508 261 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1168Q7TR25 312 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 OacylQ8BML2 685 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cds2Q99L43 444 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1406E9Q8X1 310 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1220F7BL62 311 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr996Q7TRA0 314 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1420Q8VF55 309 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem208Q9CR96 173 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ca14Q9WVT6 337 aa9.01□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zfp972A2AW65 139 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P01804 111 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Hoxa6P09092 232 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 LalbaP29752 143 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Chst14Q80V53 376 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Flrt3Q8BGT1 649 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Atg4dQ8BGV9 474 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 9030612E09RikQ8CE20 140 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mfsd4b1Q8VCV9 425 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Dok5Q91ZM9 306 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zfp958Q99LG7 467 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tex101Q9JMI7 250 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ctxnd1A0A1B0GST9 59 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cd46O88174 365 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fcgr1P26151 404 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Hist1h2baP70696 127 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 H2-T22Q31615 379 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zfp7Q3TFZ4 685 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 IslrQ6GU68 428 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem167bQ80X45 74 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zbtb49Q8BXX2 756 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Uqcc3Q8K2T4 89 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Nhp2Q9CRB2 153 aaKnown RBP9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 BlnkQ9QUN3 457 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Bex2Q9WTZ8 129 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 A0A286YDM5 308 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 MestQ07646 335 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 CtsoQ8BM88 312 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 AfmidQ8K4H1 305 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Exosc2Q8VBV3 293 aaKnown RBP9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 MmachcQ9CZD0 279 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 ReckQ9Z0J1 971 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mmp9P41245 730 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Wnt11P48615 354 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 MybphlQ5FW53 355 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr916Q8VG53 310 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Rnf2Q9CQJ4 336 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Glipr1Q9CWG1 255 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cldn15Q9Z0S5 227 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ighv6-5A0A0A6YWS9 119 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm20918J3QN17 227 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Mrpl23O35972 146 aaKnown RBP9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Slc36a4Q8CH36 500 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tmem38bQ9DAV9 292 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Trbv5A0A0B4J1G9 113 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr785A0A0N4SVC3 312 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1458A0A1L1SSD5 307 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ccr6O54689 367 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Hspb1P14602 209 aaKnown RBP9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Efnb2P52800 336 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Sirt6P59941 334 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Fam220aQ3ZN08 260 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 PnkdQ69ZP3 385 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 CebpeQ6PZD9 281 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 LssQ8BLN5 733 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ikzf4Q8C208 586 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Tctex1d1Q9D5I4 173 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r171Q9EPS6 316 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 TicrrQ8BQ33 1889 aa9□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gon4lQ9DB00 2260 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ceacam1P31809 521 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Dynlrb1P62627 96 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gng3P63216 75 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Clec12bQ149M0 275 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Cnep1r1Q3UJ81 125 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Rdh9Q8K5C8 317 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Dnaja3Q99M87 480 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 SvilQ8K4L3 2170 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Zfp13P10754 512 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Eif4ebp2P70445 120 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr536Q8VFE9 307 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Adam33Q923W9 797 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Slc52a3Q9D6X5 460 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Ldb3Q9JKS4 723 aaKnown RBP8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Gm12887B1AVM1 119 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r149E9PWL6 307 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r101E9Q365 307 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r158G3UY92 307 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Vmn1r194J3JS27 296 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 OtpO09113 325 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 P03976 113 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Itgb7P26011 806 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Psg26Q4KL65 475 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Pld4Q8BG07 503 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Dusp28Q8BTR5 163 aa8.99□□□□□ -0.97
Ubr1-201ENSMUST00000028728 Olfr1239Q8VGM8 305 aa8.99□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms