RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 SdhaQ8K2B3 664 aaKnown RBP9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1271Q8VG62 305 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1262Q8VGN2 304 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Rab40cQ8VHQ4 281 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Arrdc1Q99KN1 434 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Utp23Q9CX11 249 aaKnown RBP9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Sectm1bQ9JL59 212 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Ca14Q9WVT6 337 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Vma21-psA0A140T8R2 101 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Lnp1A0A1B0GSK3 178 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Vmn1r7E9Q8T0 311 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Slc16a7O70451 484 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Dhrs3O88876 302 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Pcp2P12660 120 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Oprm1P42866 398 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Egr3P43300 387 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Q5SPV6 233 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Pqlc2Q8C4N4 293 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Vmn1r4Q8R2D3 297 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1448Q8VFX1 314 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1044Q8VGR9 314 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Slc25a22Q9D6M3 323 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Gm12728V9GX31 77 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Gm4787B2RUD9 748 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Calhm1D3Z291 348 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Rab33bO35963 229 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Nipsnap1O55125 284 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Igkv7-33P01632 114 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Zfp386Q1WWJ5 626 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Pafah1b2Q61206 229 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Tmem108Q8BHE4 574 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Rpl24Q8BP67 157 aaKnown RBP9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Ccdc187Q8C5V8 958 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr480Q8VEZ0 312 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Rnf2Q9CQJ4 336 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Tspo2Q9CRZ8 162 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Dpep3Q9DA79 493 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Med29Q9DB91 199 aa9.64□□□□□ -0.87
Ciita-201ENSMUST00000023147 Vmn1r177E9PXM3 309 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Znf296E9Q6W4 445 aaKnown RBP9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Phxr1P15973 60 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Rpusd3Q14AI6 344 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 PilrbQ2YFS2 224 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Wdr34Q5U4F6 535 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Foxb1Q64732 325 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Onecut2Q6XBJ3 505 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Igsf21Q7TNR6 468 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr851Q7TRG0 312 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr803Q8VFI3 308 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Znf281Q99LI5 893 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Rab1bQ9D1G1 201 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Sfrp5Q9WU66 314 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 BC025446A0A087WQT1 134 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1490A0A1L1SVH0 321 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Zfp931A2AHM2 298 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr750E9Q0Z1 331 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr624F8VQI7 308 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Fam240aJ3QNP9 97 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Mtatp6P00848 226 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 P01648 108 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Col19a1Q0VF58 1136 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 H2-T22Q31615 379 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Asphd2Q80VP9 343 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Slc17a5Q8BN82 495 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 9030612E09RikQ8CE20 140 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 MepeQ8K4L6 441 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Aqp3Q8R2N1 292 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Tmem97Q8VD00 176 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1230Q8VG58 305 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Lgals8Q9JL15 316 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Il18bpQ9Z0M9 193 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Ldlrad1D3YYZ1 218 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr635K7N6B1 321 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 2410141K09RikK7N769 464 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 F2rl2O08675 369 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Cnr1P47746 473 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Tmem88bQ3TYP4 173 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Rnf223Q3UV31 285 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Gpatch2Q7TQC7 527 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Fam234aQ8C0Z1 555 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Tmem25Q9DCF1 365 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Mfap5Q9QZJ6 164 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Vsig2Q9Z109 328 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Cep290Q6A078 2472 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Scgb1b29D2XZ31 93 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Scgb1b20E9PWZ2 93 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Lemd1Q14C37 129 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Serinc4Q5XK03 492 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Flrt1Q6RKD8 674 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1014Q7TR95 305 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1013Q7TR96 305 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr988Q7TRA1 309 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 ArsjQ8BM89 598 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1443Q8VFW8 312 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Mrps30Q9D0G0 442 aaKnown RBP9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Cacna1aP97445 2368 aa9.63□□□□□ -0.87
Ciita-201ENSMUST00000023147 Olfr1154L7MU57 310 aa9.62□□□□□ -0.87
Ciita-201ENSMUST00000023147 H1f0P10922 194 aaKnown RBP9.62□□□□□ -0.87
Ciita-201ENSMUST00000023147 Spam1P48794 512 aa9.62□□□□□ -0.87
Ciita-201ENSMUST00000023147 Q0VG62 139 aa9.62□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 32.2 ms