RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 HIST1H1DP16402 221 aaKnown RBP13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 FGF9P31371 208 aaPredicted RBP13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 MC5RP33032 325 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 KIR2DS1Q14954 304 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 LIN54Q6MZP7 749 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 ZNF773Q6PK81 442 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 OR4A4PQ8NGN8 299 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 PTX4Q96A99 478 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 ATG5Q9H1Y0 275 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 OR51J1Q9H342 316 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 RDH8Q9NYR8 311 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 ZNF580Q9UK33 172 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 WASHC3Q9Y3C0 194 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 WSB1Q9Y6I7 421 aa13.13□□□□□ -0.31
CACNA1A-259ENST00000638114 NOTOA8MTQ0 251 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 SERPINB10P48595 397 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 RAB25P57735 213 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 ARFRP1Q13795 201 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 PLGLAQ15195 96 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 IGSF11Q5DX21 431 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 RNF152Q8N8N0 203 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 DRAXINQ8NBI3 349 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 OR5AN1Q8NGI8 311 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 MAFIPQ8WZ33 124 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 RAX2Q96IS3 184 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 P2RX4Q99571 388 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 FBXL15Q9H469 300 aa13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 ZNF230Q9UIE0 474 aaPredicted RBP13.12□□□□□ -0.31
CACNA1A-259ENST00000638114 G3V318 75 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 CCL24O00175 119 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 RRHO14718 337 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 GSTT2P0CG29 244 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 GSTT2BP0CG30 244 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 PSMB8P28062 276 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 TALDO1P37837 337 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 CDX1P47902 265 aaPredicted RBP13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 DEFB136Q30KP8 78 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 OR10J5Q8NHC4 309 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 CHCHD6Q9BRQ6 235 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 CABLES2Q9BTV7 478 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 GPR61Q9BZJ8 451 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 OR51E2Q9H255 320 aa13.11□□□□□ -0.31
CACNA1A-259ENST00000638114 TRAV41A0A0B4J266 112 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 M0R1X1 148 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 PROP1O75360 226 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 RBBP9O75884 186 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 TFAP2AP05549 437 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 HOXD3P31249 432 aaPredicted RBP13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 TMEM65Q6PI78 240 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 TPRA1Q86W33 373 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 OR8U1Q8NH10 309 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 DPF1Q92782 380 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 MCRIP2Q9BUT9 160 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 OR2D2Q9H210 308 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 DAPK2Q9UIK4 370 aa13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 RRP15Q9Y3B9 282 aaKnown RBP13.1□□□□□ -0.31
CACNA1A-259ENST00000638114 APOA2P02652 100 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 OR8U9P0C7N5 309 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 PPIFP30405 207 aaKnown RBP13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 LINC00205P59089 165 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 NDPQ00604 133 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 ARL6IP1Q15041 203 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 NEDD8Q15843 81 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 ECSCRQ19T08 205 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 ZNF383Q8NA42 475 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 ABHD5Q8WTS1 349 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 C4orf3Q8WVX3 66 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 GINS4Q9BRT9 223 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 TOLLIPQ9H0E2 274 aa13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 ELF5Q9UKW6 265 aaPredicted RBP13.09□□□□□ -0.31
CACNA1A-259ENST00000638114 TRBV6-7A0A0A0MS04 114 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 LOC100506127A0A0U1RQW1 187 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 DIRAS3O95661 229 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 IGKV1-16P04430 117 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 SNRPBP14678 240 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 SDC2P34741 201 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 KRTAP10-11P60412 298 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 RPS16P62249 146 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 CX3CL1P78423 397 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 MXD1Q05195 221 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 CDNFQ49AH0 187 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 ZNF660Q6AZW8 331 aaPredicted RBP13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 SFXN4Q6P4A7 337 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 PDPNQ86YL7 162 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 LGALS14Q8TCE9 139 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 CLCC1Q96S66 551 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 TSNAXQ99598 290 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 RNF5Q99942 180 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 KLK15Q9H2R5 256 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 METTL1Q9UBP6 276 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 FBXO7Q9Y3I1 522 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 RBM7Q9Y580 266 aaKnown RBP13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 A3GALT2U3KPV4 340 aa13.08□□□□□ -0.32
CACNA1A-259ENST00000638114 FCN1O00602 326 aa13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 IGLV1-40P01703 118 aa13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 DTYMKP23919 212 aa13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 PSG5Q15238 335 aa13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 SRSF7Q16629 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
CACNA1A-259ENST00000638114 KCTD21Q4G0X4 260 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms