RNA–Protein interactions for RNA: ENST00000622836.1

PCDHGC3-208, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3

Gene PCDHGC3, Length 795 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-208ENST00000622836 MC5RP33032 325 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 SOX6P35712 828 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 ARPC4P59998 168 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 SLC35B1P78383 322 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 TMEM69Q5SWH9 247 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 ANKRD13BQ86YJ7 626 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 CHPT1Q8WUD6 406 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 KCTD12Q96CX2 325 aaKnown RBP11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 NOL4LQ96MY1 436 aaPredicted RBP11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 NAA50Q9GZZ1 169 aaKnown RBP11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 TOLLIPQ9H0E2 274 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 ABCG5Q9H222 651 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 AUNIPQ9H7T9 357 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 PLSCR3Q9NRY6 295 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 COMMD3Q9UBI1 195 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 LINC00527Q9UJ94 153 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 WASHC3Q9Y3C0 194 aa11.07□□□□□ -0.64
PCDHGC3-208ENST00000622836 TCRBV4S1A1TA0A5B7 111 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 H0YJW9 148 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 J3QRK9 145 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 AP4M1O00189 453 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 NBR2O15453 112 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 KCNAB3O43448 404 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 SSX5O60225 188 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 GABARAPO95166 117 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 IGHG2P01859 326 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 APOA2P02652 100 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 OPN1MWP04001 364 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 OPN1MW2P0DN77 364 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 OPN1MW3P0DN78 364 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 RORCP51449 518 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 PLGLAQ15195 96 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 NDUFA11Q86Y39 141 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 H1FOOQ8IZA3 346 aaPredicted RBP11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 FAM71E2Q8N5Q1 922 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 WIPF2Q8TF74 440 aaPredicted RBP11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 ZNF107Q9UII5 783 aaPredicted RBP11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 ANXA10Q9UJ72 324 aa11.06□□□□□ -0.64
PCDHGC3-208ENST00000622836 SMIM31A0A1B0GVY4 71 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 XRCC3O43542 346 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 RBBP9O75884 186 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 FCER2P06734 321 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 PTHLHP12272 177 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 NFYAP23511 347 aaPredicted RBP11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 CNTFRP26992 372 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 CBX3Q13185 183 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 CTF1Q16619 201 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 CNIH2Q6PI25 160 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 C10orf99Q6UWK7 81 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 ZNF329Q86UD4 541 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 STPG2Q8N412 459 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 GVQW1Q8N7I0 195 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 BEST4Q8NFU0 473 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 OR4F17Q8NGA8 305 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 ACOT12Q8WYK0 555 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 R3HDM4Q96D70 268 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 RITA1Q96K30 269 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 OR4F4Q96R69 305 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 GON7Q9BXV9 100 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 IFT46Q9NQC8 304 aa11.05□□□□□ -0.64
PCDHGC3-208ENST00000622836 MEIS3P1A6NDR6 274 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 LINC01548A6NM66 108 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 CBX5P45973 191 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 ALDH3B2P48448 385 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 LUMP51884 338 aaPredicted RBP11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 LINC00205P59089 165 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 TAS2R20P59543 309 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 LIN54Q6MZP7 749 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 MZT2AQ6P582 158 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 PDPNQ86YL7 162 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 OR5AN1Q8NGI8 311 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 AP3S1Q92572 193 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 HSPB9Q9BQS6 159 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 SDHAF2Q9NX18 166 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 TSSC4Q9Y5U2 329 aaPredicted RBP11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 VWFP04275 2813 aa11.04□□□□□ -0.64
PCDHGC3-208ENST00000622836 TRRAPQ9Y4A5 3859 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 NOL3O60936 208 aaKnown RBP11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 PROP1O75360 226 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 EIF4EP06730 217 aaKnown RBP11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 PF4V1P10720 104 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 VDAC1P21796 283 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 RPS16P62249 146 aaKnown RBP11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 CD83Q01151 205 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 C5orf64Q2M2E5 130 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 HOGA1Q86XE5 327 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 CLVS1Q8IUQ0 354 aaPredicted RBP11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 ZNF383Q8NA42 475 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 NPBQ8NG41 125 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 FLYWCH2Q96CP2 140 aaKnown RBP11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 FBXL15Q9H469 300 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 SLC35D1Q9NTN3 355 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 NECAP2Q9NVZ3 263 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 GAB2Q9UQC2 676 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 MRPS7Q9Y2R9 242 aaKnown RBP11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 OR2W1Q9Y3N9 320 aa11.03□□□□□ -0.64
PCDHGC3-208ENST00000622836 FAM25AB3EWG3 89 aa11.02□□□□□ -0.65
PCDHGC3-208ENST00000622836 FAM25CB3EWG5 89 aa11.02□□□□□ -0.65
PCDHGC3-208ENST00000622836 FAM25GB3EWG6 89 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms