RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 RPS11P62280 158 aaKnown RBP eCLIP6.26□□□□□ -1.41
COLCA1-205ENST00000620864 KCNMB1Q16558 191 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 OTPQ5XKR4 325 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 LHFPL4Q7Z7J7 247 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 SDHCQ99643 169 aaPredicted RBP6.26□□□□□ -1.41
COLCA1-205ENST00000620864 GSN-AS1Q9NRJ2 163 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 ELOVL5Q9NYP7 299 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 SCN7AQ01118 1682 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 F2RL2O00254 374 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 SLC25A20O43772 301 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FTH1P19P0C7X4 201 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 TIMM23BQ5SRD1 257 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 ALKAL1Q6UXT8 129 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF683Q8IZ20 524 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 OR4D5Q8NGN0 318 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF257Q9Y2Q1 563 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 CARHSP1Q9Y2V2 147 aaKnown RBP6.26□□□□□ -1.41
COLCA1-205ENST00000620864 RP1P56715 2156 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 A0A1B0GTH9 108 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 FAM157AC9JC47 383 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 CXCL13O43927 109 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 GUCA2BQ16661 112 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 PATE1Q8WXA2 126 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 HEXA-AS1Q9H8Q6 139 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 COA4Q9NYJ1 87 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 TRAV8-2A0A0B4J237 113 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 TRAV8-4A0A0B4J246 113 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 A0A1W2PNR3 127 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 HKR1P10072 659 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 DLX6P56179 175 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 TCF15Q12870 199 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 MESTQ5EB52 335 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 GAPTQ8N292 157 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 ABHD3Q8WU67 409 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 WNT5BQ9H1J7 359 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 SLC26A1Q9H2B4 701 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 RNF122Q9H9V4 155 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 PGPEP1Q9NXJ5 209 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 PHLDA3Q9Y5J5 127 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 IGKV3-7A0A075B6H7 116 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 IGHV3-15A0A0B4J1V0 119 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 TCRBV5S1A1TA0A578 114 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 CFHR5Q9BXR6 569 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 PLSCR4Q9NRQ2 329 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 METRNQ9UJH8 293 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 TNRC6CQ9HCJ0 1690 aaKnown RBP6.26□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF137PP52743 207 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 GAGE2BQ13066 116 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 GAGE2EQ4V326 116 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 C2orf83Q53S99 150 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 CADM4Q8NFZ8 388 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 KCNS1Q96KK3 526 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 CXCL16Q9H2A7 254 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 GAGE2DQ9UEU5 116 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 PXMP4Q9Y6I8 212 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 CHD5Q8TDI0 1954 aa6.26□□□□□ -1.41
COLCA1-205ENST00000620864 IGHV1OR15-9A0A0B4J2B8 117 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 RPL36A-HNRNPH2H7BZ11 118 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 K7ESM1 405 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 SRIP30626 198 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 MC5RP33032 325 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 HIKESHIQ53FT3 197 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 GPR35Q9HC97 309 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 FZR1Q9UM11 496 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 ODAMA1E959 279 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 OR2A4O95047 310 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 SPATA46Q5T0L3 261 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 OR1K1Q8NGR3 316 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 SSMEM1Q8WWF3 244 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 OR2A7Q96R45 310 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 HDHD3Q9BSH5 251 aaPredicted RBP6.25□□□□□ -1.41
COLCA1-205ENST00000620864 MRPS18AQ9NVS2 196 aaKnown RBP6.25□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF815PA8K554 130 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 DANCRP0C864 163 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 SRD5A2P31213 254 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 MVDP53602 400 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 TNFAIP6P98066 277 aaPredicted RBP6.25□□□□□ -1.41
COLCA1-205ENST00000620864 FOXF1Q12946 379 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 METTL26Q96S19 204 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 NOVP48745 357 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 RRN3P1Q2M238 152 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 PRICKLE4Q2TBC4 344 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 TM4SF19Q96DZ7 209 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 TINAGQ9UJW2 476 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 OR51B2Q9Y5P1 312 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 COL18A1P39060 1754 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 ATRXP46100 2492 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 DOPEY2Q9Y3R5 2298 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 TRAV8-7A0A075B6U6 113 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 NKX2-6A6NCS4 301 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 J3QR06 171 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 NDUFB4O95168 129 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 UCP3P55916 312 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 GPBAR1Q8TDU6 330 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 IFNL4K9M1U5 179 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 ASIPP42127 132 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 ZNF660Q6AZW8 331 aaPredicted RBP6.25□□□□□ -1.41
COLCA1-205ENST00000620864 OR4C13Q8NGP0 309 aa6.25□□□□□ -1.41
COLCA1-205ENST00000620864 HIST1H2BAQ96A08 127 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms