RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TRDCB7Z8K6 153 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 I3L521 148 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 GSTP1P09211 210 aaKnown RBP12.31□□□□□ -0.44
VRK3-221ENST00000600284 SERPINB10P48595 397 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 CLDN12P56749 244 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 TMEM267Q0VDI3 215 aaPredicted RBP12.31□□□□□ -0.44
VRK3-221ENST00000600284 PLAC9Q5JTB6 97 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 VAX1Q5SQQ9 334 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 CD200R1LQ6Q8B3 271 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 IZUMO2Q6UXV1 221 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 PARP12Q9H0J9 701 aaKnown RBP12.31□□□□□ -0.44
VRK3-221ENST00000600284 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
VRK3-221ENST00000600284 TMEM272A0A1B0GTI8 110 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 H7C2Y5 167 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 MRPS14O60783 128 aaKnown RBP12.3□□□□□ -0.44
VRK3-221ENST00000600284 PROP1O75360 226 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 DIRAS3O95661 229 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 OR8U8P0C7N1 319 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 GALP22466 123 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 INSL3P51460 131 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 CX3CL1P78423 397 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 MRPS15P82914 257 aaKnown RBP12.3□□□□□ -0.44
VRK3-221ENST00000600284 PLGLAQ15195 96 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 SSX1Q16384 188 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 C19orf54Q5BKX5 351 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 GLDNQ6ZMI3 551 aaPredicted RBP12.3□□□□□ -0.44
VRK3-221ENST00000600284 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.3□□□□□ -0.44
VRK3-221ENST00000600284 OR4A4PQ8NGN8 299 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 CNBD2Q96M20 576 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 B9D2Q9BPU9 175 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 FBXL15Q9H469 300 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 RNF150Q9ULK6 438 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 RAB26Q9ULW5 256 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 GAB2Q9UQC2 676 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 NUBP2Q9Y5Y2 271 aa12.3□□□□□ -0.44
VRK3-221ENST00000600284 IGKV1-6A0A0C4DH72 117 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 TRDV1A0A1B0GX56 115 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 SPDEFO95238 335 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 CD3GP09693 182 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 CD69Q07108 199 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 ZNF616Q08AN1 781 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 HES5Q5TA89 166 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 PYHIN1Q6K0P9 492 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 ZNF562Q6V9R5 426 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 OR1N2Q8NGR9 330 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 RAB3CQ96E17 227 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 CENPOQ9BU64 300 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 GNB4Q9HAV0 340 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 NDUFB11Q9NX14 153 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 RDH8Q9NYR8 311 aa12.29□□□□□ -0.44
VRK3-221ENST00000600284 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 SEC14L6B5MCN3 397 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 FCN1O00602 326 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 RAB6AP20340 208 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 GADD45AP24522 165 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 MYL9P24844 172 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 LUMP51884 338 aaPredicted RBP12.28□□□□□ -0.44
VRK3-221ENST00000600284 NDPQ00604 133 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 PSG5Q15238 335 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 AKIRIN2Q53H80 203 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 PDPNQ86YL7 162 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 OR10R2Q8NGX6 335 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 TSNAXQ99598 290 aaKnown RBP12.28□□□□□ -0.44
VRK3-221ENST00000600284 SCOCQ9UIL1 159 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 FOXA2Q9Y261 457 aaPredicted RBP12.28□□□□□ -0.44
VRK3-221ENST00000600284 KCNK7Q9Y2U2 307 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 FBXO7Q9Y3I1 522 aa12.28□□□□□ -0.44
VRK3-221ENST00000600284 A0A1W2PN81 502 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 METTL21EPA6NDL7 271 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 FABP7O15540 132 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 APOA2P02652 100 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 TFAP2AP05549 437 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 EGR2P11161 476 aaPredicted RBP12.27□□□□□ -0.45
VRK3-221ENST00000600284 RAB3BP20337 219 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 CHRNA7P36544 502 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 GABARAPL2P60520 117 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 RPS16P62249 146 aaKnown RBP12.27□□□□□ -0.45
VRK3-221ENST00000600284 PLA2G7Q13093 441 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 SRSF7Q16629 238 aaKnown RBP eCLIP12.27□□□□□ -0.45
VRK3-221ENST00000600284 ECSCRQ19T08 205 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 ZNF383Q8NA42 475 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 CABLES2Q9BTV7 478 aa12.27□□□□□ -0.45
VRK3-221ENST00000600284 METTL1Q9UBP6 276 aaKnown RBP12.27□□□□□ -0.45
VRK3-221ENST00000600284 TRBV6-7A0A0A0MS04 114 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 SHISA3A0PJX4 238 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 RAB27BO00194 218 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 SOX15O60248 233 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 IGKV1-16P04430 117 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 FCGR3AP08637 254 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 CD40LGP29965 261 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 LGALS7P47929 136 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 OR10A3P58181 314 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 GNB1P62873 340 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 TAGLNQ01995 201 aaKnown RBP12.26□□□□□ -0.45
VRK3-221ENST00000600284 ARL6IP1Q15041 203 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 ZNF260Q3ZCT1 412 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 PPP1R27Q86WC6 154 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 DRAXINQ8NBI3 349 aaPredicted RBP12.26□□□□□ -0.45
VRK3-221ENST00000600284 OR10J5Q8NHC4 309 aa12.26□□□□□ -0.45
VRK3-221ENST00000600284 FLYWCH2Q96CP2 140 aaKnown RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms