RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	OPN1MW3	P0DN78	364 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	CNTFR	P26992	372 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	MC5R	P33032	325 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	SOX6	P35712	828 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	GPR12	P47775	334 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	GNG2	P59768	71 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	PNLIPRP3	Q17RR3	467 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	FAM131A	Q6UXB0	335 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	GLDN	Q6ZMI3	551 aa	Predicted RBP	7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	ZNF329	Q86UD4	541 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	FOXRED2	Q8IWF2	684 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	DRAXIN	Q8NBI3	349 aa	Predicted RBP	7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	OR4X2	Q8NGF9	303 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	OR5AN1	Q8NGI8	311 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	OR8U1	Q8NH10	309 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	CHPT1	Q8WUD6	406 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	NUDCD2	Q8WVJ2	157 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	GINS4	Q9BRT9	223 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	DCSTAMP	Q9H295	470 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	LINC00527	Q9UJ94	153 aa		7.26	□□□□□ -1.25
DNMT1-223	ENST00000591239	TRAV18	A0A075B6X5	111 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239		A0A1W2PRX2	142 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	TCRBV4S1A1T	A0A5B7	111 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239		H0YJW9	148 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239		H7C2Y5	167 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	AP4M1	O00189	453 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	NBR2	O15453	112 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	KCNAB3	O43448	404 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	SSX5	O60225	188 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	LINC00205	P59089	165 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	VBP1	P61758	197 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	NCS1	P62166	190 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	STPG2	Q8N412	459 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	NPB	Q8NG41	125 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	SLC25A46	Q96AG3	418 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	R3HDM4	Q96D70	268 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	HSPB9	Q9BQS6	159 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	OR2D2	Q9H210	308 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	DIABLO	Q9NR28	239 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	WASHC3	Q9Y3C0	194 aa		7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239	TSSC4	Q9Y5U2	329 aa	Predicted RBP	7.25	□□□□□ -1.25
DNMT1-223	ENST00000591239		M0R1X1	148 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	XRCC3	O43542	346 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	NDUFA3	O95167	84 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	IGKV1-16	P04430	117 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	TFAP2A	P05549	437 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	CTXN2	P0C2S0	81 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	SLC35B1	P78383	322 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	C5orf64	Q2M2E5	130 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	UBE2NL	Q5JXB2	153 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	CNIH2	Q6PI25	160 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	ANKRD13B	Q86YJ7	626 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	H1FOO	Q8IZA3	346 aa	Predicted RBP	7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	SAMD12	Q8N8I0	201 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	ZNF383	Q8NA42	475 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	OR4F17	Q8NGA8	305 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	S100A16	Q96FQ6	103 aa	Known RBP	7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	OR4F4	Q96R69	305 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	GON7	Q9BXV9	100 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	MRPS26	Q9BYN8	205 aa	Known RBP	7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	AUNIP	Q9H7T9	357 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	SDHAF2	Q9NX18	166 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	KIAA1456	Q9P272	454 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	ZNF107	Q9UII5	783 aa	Predicted RBP	7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	ANXA10	Q9UJ72	324 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	GAB2	Q9UQC2	676 aa		7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	RBM7	Q9Y580	266 aa	Known RBP	7.24	□□□□□ -1.25
DNMT1-223	ENST00000591239	RRH	O14718	337 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	RBBP9	O75884	186 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	HLA-DRB1	P01911	266 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	APOA2	P02652	100 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	IGF1	P05019	195 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	NFYA	P23511	347 aa	Predicted RBP	7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	CTF1	Q16619	201 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	KHDC1L	Q5JSQ8	128 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	GPR107	Q5VW38	600 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	LIN54	Q6MZP7	749 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	TEX38	Q6PEX7	206 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	COMMD1	Q8N668	190 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	GVQW1	Q8N7I0	195 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	BEST4	Q8NFU0	473 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	RNF5	Q99942	180 aa		7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	NAA50	Q9GZZ1	169 aa	Known RBP	7.23	□□□□□ -1.25
DNMT1-223	ENST00000591239	IGHV7-81	A0A0B4J1V7	117 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239		A6NJY4	79 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239		J3QRK9	145 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	GABARAP	O95166	117 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	PF4V1	P10720	104 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	PTHLH	P12272	177 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	VDAC1	P21796	283 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	ALDH3B2	P48448	385 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	RORC	P51449	518 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	LUM	P51884	338 aa	Predicted RBP	7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	ARPC4	P59998	168 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	RPS16	P62249	146 aa	Known RBP	7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	PLGLA	Q15195	96 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	HOGA1	Q86XE5	327 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	PDPN	Q86YL7	162 aa		7.22	□□□□□ -1.25
DNMT1-223	ENST00000591239	FLYWCH2	Q96CP2	140 aa	Known RBP	7.22	□□□□□ -1.25

Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms