RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 HES3Q5TGS1 186 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 ACP7Q6ZNF0 438 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 FAM214BQ7L5A3 538 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 RPP25LQ8N5L8 163 aaKnown RBP12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 HIST1H2BHQ93079 126 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 CIB3Q96Q77 187 aaPredicted RBP12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 HIST1H2BNQ99877 126 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 HIST1H2BMQ99879 126 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 AGMATQ9BSE5 352 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 TMEM147Q9BVK8 224 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 MRPL37Q9BZE1 423 aaKnown RBP12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 TUBG2Q9NRH3 451 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 GAR1Q9NY12 217 aaKnown RBP12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 LAMP3Q9UQV4 416 aa12.05□□□□□ -0.48
NEDD4L-220ENST00000587881 SEC14L6B5MCN3 397 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 MLNRO43193 412 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 CLDN14O95500 239 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 TRGC2P03986 189 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 OPN1MWP04001 364 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 OPN1MW2P0DN77 364 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 OPN1MW3P0DN78 364 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 ZNF816Q0VGE8 651 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 ATP1A1-AS1Q5TC04 95 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 WDR25Q64LD2 544 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 FAM180AQ6UWF9 173 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 ZNF808Q8N4W9 903 aaPredicted RBP12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 DEFB123Q8N688 67 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 NAT8Q9UHE5 227 aa12.04□□□□□ -0.48
NEDD4L-220ENST00000587881 ELOA3CA0A087WX78 387 aaPredicted RBP12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 ODAMA1E959 279 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 IFNL4K9M1U5 179 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 WNT9BO14905 357 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 NDUFS6O75380 124 aaKnown RBP12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 HOXC12P31275 282 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 TNFSF10P50591 281 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 ZNF66Q6ZN08 573 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 ZNF826PQ6ZT77 177 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 OR10P1Q8NGE3 313 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 C5orf30Q96GV9 206 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 LURAP1Q96LR2 239 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 TAAR6Q96RI8 345 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 DOCK11Q5JSL3 2073 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 TRBV24-1A0A075B6N3 115 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 CTXND1A0A1B0GTU2 59 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 IFITM10A6NMD0 228 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 C17orf98A8MV24 154 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 S1PR2O95136 353 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 IGKV1D-33P01593 117 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 IGKV1-33P01594 117 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 IGKV3-15P01624 115 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 IGHG3P01860 377 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 CD55P08174 381 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 GABRA2P47869 451 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 PSMB3P49720 205 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 NKX6-1P78426 367 aaPredicted RBP12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 MEF2BQ02080 365 aaPredicted RBP12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 BEND4Q6ZU67 534 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 TMPRSS7Q7RTY8 843 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 H2BFWTQ7Z2G1 175 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 CXorf67Q86X51 503 aaPredicted RBP12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 GCNT2Q8N0V5 402 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 DTD1Q8TEA8 209 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 COQ2Q96H96 371 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 TRIB1Q96RU8 372 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 CLN8Q9UBY8 286 aa12.03□□□□□ -0.48
NEDD4L-220ENST00000587881 URB1O60287 2271 aaKnown RBP12.02□□□□□ -0.48
NEDD4L-220ENST00000587881 PMS2P5A8MQ11 134 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 TMEM250H0YL14 139 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 IGHV2-70P01814 119 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 KITLGP21583 273 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 FGF7P21781 194 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 BRWD1-AS2P59051 145 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 CD81P60033 236 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 GUSBP1Q15486 140 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 OR2B11Q5JQS5 317 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 ACSM6Q6P461 480 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 OR10G9Q8NGN4 311 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 OR10G7Q8NGN6 311 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 MRGPRDQ8TDS7 321 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 SMIM7Q9BQ49 75 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 ACTR3CQ9C0K3 210 aaPredicted RBP12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 WASF3Q9UPY6 502 aa12.02□□□□□ -0.49
NEDD4L-220ENST00000587881 PPP1R2P9O14990 202 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 COX5AP20674 150 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 PMP22Q01453 160 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 WDR82Q6UXN9 313 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 CYP2G1PQ6ZSU1 146 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 WDR31Q8NA23 367 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 C1orf162Q8NEQ5 155 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 HSD17B10Q99714 261 aaKnown RBP12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 GPR179Q6PRD1 2367 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 PCNX2A6NKB5 2137 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 M0R296 226 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 TIMM8AO60220 97 aaPredicted RBP12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 ZG16O60844 167 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 TRGC1P0CF51 173 aa12.01□□□□□ -0.49
NEDD4L-220ENST00000587881 GNB2P62879 340 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms