RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 IGKV1-16P04430 117 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 IFNA6P05013 189 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 MYL12AP19105 171 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 SYNJ2BPP57105 145 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 SSBP2P81877 361 aaPredicted RBP12.43□□□□□ -0.42
NPC1-205ENST00000587163 ZFP1Q6P2D0 407 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 SVOPQ8N4V2 548 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 GRPEL2Q8TAA5 225 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 NEDD4LQ96PU5 975 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 RNF5Q99942 180 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 UQCC2Q9BRT2 126 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 TUBA4BQ9H853 241 aa12.43□□□□□ -0.42
NPC1-205ENST00000587163 C13orf42A0A1B0GVH6 325 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 IZUMO1RA6ND01 250 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 H0Y980 276 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 JTBO76095 146 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 NAPSAO96009 420 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 CSN3P07498 182 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 HTR2CP28335 458 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 DEFA5Q01523 94 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 FXYD3Q14802 87 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 ZNF880Q6PDB4 577 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 POC5Q8NA72 575 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 C11orf54Q9H0W9 315 aaPredicted RBP12.42□□□□□ -0.42
NPC1-205ENST00000587163 FAM53CQ9NYF3 392 aa12.42□□□□□ -0.42
NPC1-205ENST00000587163 SLC22A1O15245 554 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 PJVKQ0ZLH3 352 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 ZNF383Q8NA42 475 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 SETD6Q8TBK2 473 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 TMEM80Q96HE8 168 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 FAM110AQ9BQ89 295 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 NICN1Q9BSH3 213 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 HIPK2Q9H2X6 1198 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 KCNK15Q9H427 330 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 OR1A1Q9P1Q5 309 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 GHRLQ9UBU3 117 aa12.41□□□□□ -0.42
NPC1-205ENST00000587163 IRGMA1A4Y4 181 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 DYNC1I1O14576 645 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 ITGB1BP1O14713 200 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 SLC25A17O43808 307 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 TRBV12-3P01733 135 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 CPEP16870 476 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 CEACAM6P40199 344 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 RPS16P62249 146 aaKnown RBP12.4□□□□□ -0.42
NPC1-205ENST00000587163 RPS27AP62979 156 aaKnown RBP12.4□□□□□ -0.42
NPC1-205ENST00000587163 LINC00322Q6ZN03 302 aaPredicted RBP12.4□□□□□ -0.42
NPC1-205ENST00000587163 NKAIN3Q8N8D7 197 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 TSNAXQ99598 290 aaKnown RBP12.4□□□□□ -0.42
NPC1-205ENST00000587163 KRTAP17-1Q9BYP8 105 aa12.4□□□□□ -0.42
NPC1-205ENST00000587163 CHMP1AQ9HD42 196 aaPredicted RBP12.4□□□□□ -0.42
NPC1-205ENST00000587163 PLECQ15149 4684 aaKnown RBP12.4□□□□□ -0.42
NPC1-205ENST00000587163 A0A0G2JLM5 398 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 H3BUA1 57 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 CELP19835 753 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 MECP2P51608 486 aaKnown RBP12.39□□□□□ -0.43
NPC1-205ENST00000587163 UNC119Q13432 240 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 INSL4Q14641 139 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 GTSCR1Q86UQ5 136 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 ZNF555Q8NEP9 628 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 GGHQ92820 318 aa12.39□□□□□ -0.43
NPC1-205ENST00000587163 HDHD3Q9BSH5 251 aaPredicted RBP12.39□□□□□ -0.43
NPC1-205ENST00000587163 PEF1Q9UBV8 284 aaKnown RBP12.39□□□□□ -0.43
NPC1-205ENST00000587163 A0A0A6YYD4 124 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 RBMXL2O75526 392 aaKnown RBP12.38□□□□□ -0.43
NPC1-205ENST00000587163 SPDEFO95238 335 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 ST3GAL4Q11206 333 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 DYRK1AQ13627 763 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 MOGAT2Q3SYC2 334 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 LCN12Q6JVE5 192 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 ZNF343Q6P1L6 599 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 TM2D1Q9BX74 207 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 PLEKHA3Q9HB20 300 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 SMPD3Q9NY59 655 aaPredicted RBP12.38□□□□□ -0.43
NPC1-205ENST00000587163 SIGLEC8Q9NYZ4 499 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 CEPT1Q9Y6K0 416 aa12.38□□□□□ -0.43
NPC1-205ENST00000587163 CNIH1O95406 144 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 IGLV2-23P01705 113 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 CRYGBP07316 175 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 SCTP09683 121 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 UBBP0CG47 229 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 ZBTB25P24278 435 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 TAS2R43P59537 309 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 QRFPP83859 136 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 C1orf100Q5SVJ3 147 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 LRRTM1Q86UE6 522 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 PQLC1Q8N2U9 271 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 Q8N402 240 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 PTX4Q96A99 478 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 TINAGL1Q9GZM7 467 aaPredicted RBP12.37□□□□□ -0.43
NPC1-205ENST00000587163 S100A14Q9HCY8 104 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 AK3Q9UIJ7 227 aa12.37□□□□□ -0.43
NPC1-205ENST00000587163 TRBV6-6A0A0A6YYG2 114 aa12.36□□□□□ -0.43
NPC1-205ENST00000587163 SHISA3A0PJX4 238 aa12.36□□□□□ -0.43
NPC1-205ENST00000587163 RBMY1BA6NDE4 496 aaKnown RBP12.36□□□□□ -0.43
NPC1-205ENST00000587163 RBMY1EA6NEQ0 496 aaKnown RBP12.36□□□□□ -0.43
NPC1-205ENST00000587163 BRI3O95415 125 aa12.36□□□□□ -0.43
NPC1-205ENST00000587163 CD1AP06126 327 aa12.36□□□□□ -0.43
NPC1-205ENST00000587163 RBMY1DP0C7P1 496 aaKnown RBP12.36□□□□□ -0.43
NPC1-205ENST00000587163 HLA-DRB3P79483 266 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms