RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 SESN1Q9Y6P5 492 aa11.45□□□□□ -0.58
UBBP4-202ENST00000584755 HELZ2Q9BYK8 2649 aaKnown RBP11.45□□□□□ -0.58
UBBP4-202ENST00000584755 YLPM1P49750 1951 aaKnown RBP11.45□□□□□ -0.58
UBBP4-202ENST00000584755 SAA2-SAA4A0A096LPE2 208 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 TRAV14DV4A0A0A6YYC5 116 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 C13orf42A0A1B0GVH6 325 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 LINC00473A8K010 186 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 RAB29O14966 203 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 SAA2P0DJI9 122 aaPredicted RBP11.44□□□□□ -0.58
UBBP4-202ENST00000584755 RPA2P15927 270 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 BRWD1-AS2P59051 145 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 FGL1Q08830 312 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 NMSQ5H8A3 153 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 ZNF787Q6DD87 383 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 C1orf229Q6ZS94 237 aaPredicted RBP11.44□□□□□ -0.58
UBBP4-202ENST00000584755 ZNF695Q8IW36 515 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 CLDND2Q8NHS1 167 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 PPP1R1CQ8WVI7 109 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 TMEM133Q9H2Q1 129 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 NARFLQ9H6Q4 476 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 TACC2O95359 2948 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 FBN2P35556 2912 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 LOC105371242A0A075B767 164 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 A0A1W2PPE3 182 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 IGKV1-39P01597 117 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 IGKV1D-39P04432 117 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 SERPINE2P07093 398 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 VDAC1P21796 283 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 GNG10P50151 68 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 ZNF137PP52743 207 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 PAX2Q02962 417 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 RPL39P5Q59GN2 51 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 LAMTOR1Q6IAA8 161 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 BTNL3Q6UXE8 466 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 FAM168AQ92567 244 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 NRGNQ92686 78 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 PIMREGQ9BSJ6 248 aa11.44□□□□□ -0.58
UBBP4-202ENST00000584755 SPG11Q96JI7 2443 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 CRYBG3Q68DQ2 2970 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 HMSDA8MTL9 139 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 J3QR06 171 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 M0R1W7 72 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 RBFOX2O43251 390 aaKnown RBP eCLIP11.43□□□□□ -0.58
UBBP4-202ENST00000584755 SLC25A4P12235 298 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 ZFP36P26651 326 aaKnown RBP11.43□□□□□ -0.58
UBBP4-202ENST00000584755 IAH1Q2TAA2 248 aaPredicted RBP11.43□□□□□ -0.58
UBBP4-202ENST00000584755 FAM71F2Q6NXP2 309 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 CLEC2AQ6UVW9 174 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 C1orf122Q6ZSJ8 110 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 ZNF833PQ6ZTB9 187 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 LYG1Q8N1E2 194 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 KIR3DL3Q8N743 410 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 Q8N7P7 452 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 ZBTB8BQ8NAP8 495 aaPredicted RBP11.43□□□□□ -0.58
UBBP4-202ENST00000584755 OR9G1Q8NH87 305 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 TCTEX1D2Q8WW35 142 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 DDB2Q92466 427 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 TNFRSF14Q92956 283 aa11.43□□□□□ -0.58
UBBP4-202ENST00000584755 LSM10Q969L4 123 aaKnown RBP11.43□□□□□ -0.58
UBBP4-202ENST00000584755 hCG_1809904A0A1W2PP81 198 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 A0A1W2PPE2 198 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 A0A1W2PR64 198 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 A0A1W2PRV1 198 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 M0R1X1 148 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 RAMP3O60896 148 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 SNAPC5O75971 98 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 MPC2O95563 127 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 SLC25A6P12236 298 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 PSMB6P28072 239 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 DSCR9P59020 149 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 NCR3LG1Q68D85 454 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 TMEM65Q6PI78 240 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 SPAG16Q8N0X2 631 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 C9orf62Q8N4C0 152 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 CD300LFQ8TDQ1 290 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 ADTRPQ96IZ2 230 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 S1PR3Q99500 378 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 COMMD9Q9P000 198 aa11.42□□□□□ -0.58
UBBP4-202ENST00000584755 POLR3KQ9Y2Y1 108 aaPredicted RBP11.42□□□□□ -0.58
UBBP4-202ENST00000584755 ENSAO43768 121 aaKnown RBP11.41□□□□□ -0.58
UBBP4-202ENST00000584755 IGLV1-47P01700 117 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 P0C879 139 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 LYL1P12980 280 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 ZNF16P17020 682 aaPredicted RBP11.41□□□□□ -0.58
UBBP4-202ENST00000584755 KIR2DS2P43631 304 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 LPAR6P43657 344 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 THBS3P49746 956 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 LINC00205P59089 165 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 KRTAP10-9P60411 292 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 C11orf87Q6NUJ2 197 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 ABHD12Q8N2K0 398 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 OR4D5Q8NGN0 318 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 ST6GALNAC6Q969X2 333 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 PERPQ96FX8 193 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 SPIN2AQ99865 258 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 SPIN2BQ9BPZ2 258 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 UNKLQ9H9P5 680 aaKnown RBP11.41□□□□□ -0.58
UBBP4-202ENST00000584755 ZNRD1Q9P1U0 126 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 PTPN13Q12923 2485 aa11.41□□□□□ -0.58
UBBP4-202ENST00000584755 ARID1AO14497 2285 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms