RNA–Protein interactions for RNA: ENST00000581021.5

SS18-218, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-218ENST00000581021 CENPVQ7Z7K6 275 aaPredicted RBP15.87■□□□□ 0.13
SS18-218ENST00000581021 ZNF329Q86UD4 541 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 CROCCP3Q8IVE0 287 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 ZNF383Q8NA42 475 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 OR8H1Q8NGG4 311 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 OR5AN1Q8NGI8 311 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 OR8U1Q8NH10 309 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 OR10J5Q8NHC4 309 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 AUNIPQ9H7T9 357 aa15.87■□□□□ 0.13
SS18-218ENST00000581021 ANKRD13BQ86YJ7 626 aa15.86■□□□□ 0.13
SS18-218ENST00000581021 GVQW1Q8N7I0 195 aa15.86■□□□□ 0.13
SS18-218ENST00000581021 SAMD12Q8N8I0 201 aa15.86■□□□□ 0.13
SS18-218ENST00000581021 OR2D2Q9H210 308 aa15.86■□□□□ 0.13
SS18-218ENST00000581021 DCSTAMPQ9H295 470 aa15.86■□□□□ 0.13
SS18-218ENST00000581021 SDHAF2Q9NX18 166 aa15.86■□□□□ 0.13
SS18-218ENST00000581021 ZNF107Q9UII5 783 aaPredicted RBP15.86■□□□□ 0.13
SS18-218ENST00000581021 A0A0A6YYH2 397 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 OR5H14A6NHG9 310 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 A6NJ64 397 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 PITPNAQ00169 270 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 UBE2NLQ5JXB2 153 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 GPR107Q5VW38 600 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 NDUFA11Q86Y39 141 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 GINS4Q9BRT9 223 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 GHITMQ9H3K2 345 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 ZNF221Q9UK13 617 aa15.85■□□□□ 0.13
SS18-218ENST00000581021 A0A1W2PRX2 142 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 PSMB11A5LHX3 300 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 M0R1X1 148 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 NBR2O15453 112 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 IGKV1-16P04430 117 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 EIF4EP06730 217 aaKnown RBP15.84■□□□□ 0.13
SS18-218ENST00000581021 STPG2Q8N412 459 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 NPBQ8NG41 125 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 PHF21AQ96BD5 680 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 RASL11BQ9BPW5 248 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 ANXA10Q9UJ72 324 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 WASHC3Q9Y3C0 194 aa15.84■□□□□ 0.13
SS18-218ENST00000581021 XRCC3O43542 346 aa15.83■□□□□ 0.12
SS18-218ENST00000581021 NDUFA3O95167 84 aa15.83■□□□□ 0.12
SS18-218ENST00000581021 FCER2P06734 321 aa15.83■□□□□ 0.12
SS18-218ENST00000581021 NFYAP23511 347 aaPredicted RBP15.83■□□□□ 0.12
SS18-218ENST00000581021 SOX6P35712 828 aa15.83■□□□□ 0.12
SS18-218ENST00000581021 C5orf64Q2M2E5 130 aa15.83■□□□□ 0.12
SS18-218ENST00000581021 ZNF436-AS1Q8NC38 126 aaPredicted RBP15.83■□□□□ 0.12
SS18-218ENST00000581021 DIABLOQ9NR28 239 aa15.83■□□□□ 0.12
SS18-218ENST00000581021 IGKV1D-13A0A0B4J2D9 117 aa15.82■□□□□ 0.12
SS18-218ENST00000581021 IGKV1-13P0DP09 117 aa15.82■□□□□ 0.12
SS18-218ENST00000581021 NDPQ00604 133 aa15.82■□□□□ 0.12
SS18-218ENST00000581021 CFHR3Q02985 330 aa15.82■□□□□ 0.12
SS18-218ENST00000581021 CHPT1Q8WUD6 406 aa15.82■□□□□ 0.12
SS18-218ENST00000581021 SNAPC3Q92966 411 aa15.82■□□□□ 0.12
SS18-218ENST00000581021 KCTD12Q96CX2 325 aaKnown RBP15.82■□□□□ 0.12
SS18-218ENST00000581021 GAB2Q9UQC2 676 aa15.82■□□□□ 0.12
SS18-218ENST00000581021 IGHV7-81A0A0B4J1V7 117 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 TCRBV4S1A1TA0A5B7 111 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 MEIS3P1A6NDR6 274 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 H7C2Y5 167 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 J3QRK9 145 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 AP4M1O00189 453 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 IGLV2-14P01704 120 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 HLA-DRB1P01911 266 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 TAS2R20P59543 309 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 CNIH2Q6PI25 160 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 C18orf65Q6ZTR6 163 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 HOGA1Q86XE5 327 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 FOXRED2Q8IWF2 684 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 OR4X2Q8NGF9 303 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 FBXL15Q9H469 300 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 COMMD3Q9UBI1 195 aa15.81■□□□□ 0.12
SS18-218ENST00000581021 TUSC2O75896 110 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 MC5RP33032 325 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 TMEM69Q5SWH9 247 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 LCNL1Q6ZST4 164 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 GPR141Q7Z602 305 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 BEST4Q8NFU0 473 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 R3HDM4Q96D70 268 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 S100A16Q96FQ6 103 aaKnown RBP15.8■□□□□ 0.12
SS18-218ENST00000581021 TPSG1Q9NRR2 321 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 FBXO7Q9Y3I1 522 aa15.8■□□□□ 0.12
SS18-218ENST00000581021 TSSC4Q9Y5U2 329 aaPredicted RBP15.8■□□□□ 0.12
SS18-218ENST00000581021 LINC00473A8K010 186 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 FCN1O00602 326 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 RRHO14718 337 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 KCNAB3O43448 404 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 OPN1MWP04001 364 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 IGF1P05019 195 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 OPN1MW2P0DN77 364 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 OPN1MW3P0DN78 364 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 PSG5Q15238 335 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 DDB2Q92466 427 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 ANAPC10Q9UM13 185 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 OR2W1Q9Y3N9 320 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 PLXNB1O43157 2135 aa15.79■□□□□ 0.12
SS18-218ENST00000581021 ATP6V0E1O15342 81 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 HPGDSO60760 199 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 RBBP9O75884 186 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 IGLV2-23P01705 113 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 HLA-DQB1P01920 261 aa15.78■□□□□ 0.12
SS18-218ENST00000581021 CTXN2P0C2S0 81 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms