RNA–Protein interactions for RNA: ENST00000580574.1

CCDC144CP-203, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 3

Gene CCDC144CP, Length 896 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-203ENST00000580574 ZNF833PQ6ZTB9 187 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 KCTD9Q7L273 389 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 VMO1Q7Z5L0 202 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 TBC1D26Q86UD7 250 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 CCDC71LQ8N9Z2 235 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 BEND2Q8NDZ0 799 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 WFDC11Q8NEX6 87 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 MITD1Q8WV92 249 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 CLEC7AQ9BXN2 247 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 OR51J1Q9H342 316 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 LPAR2Q9HBW0 351 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 SIRT7Q9NRC8 400 aa10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 RBM7Q9Y580 266 aaKnown RBP10.55□□□□□ -0.72
CCDC144CP-203ENST00000580574 ZNF469Q96JG9 3925 aaPredicted RBP10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 ITPR3Q14573 2671 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 SAA2-SAA4A0A096LPE2 208 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 A0A0B4J2A0 478 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 DBX1A6NMT0 343 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 ODF3BA8MYP8 253 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 RNASEK-C17orf49H0YIS7 233 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 DUS4LO95620 317 aaKnown RBP10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 MSMBP08118 114 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 SAA2P0DJI9 122 aaPredicted RBP10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 HOXB4P17483 251 aaPredicted RBP10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 F2RP25116 425 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 DUTP33316 252 aaKnown RBP10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 GPR12P47775 334 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 BRWD1-AS2P59051 145 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 TMEM187Q14656 261 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 RPL39P5Q59GN2 51 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 LDLRAD2Q5SZI1 272 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 SGPP2Q8IWX5 399 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 CMTM1Q8IZ96 169 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 LINC01356Q8N9X3 169 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 GLYATL2Q8WU03 294 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 TP53RKQ96S44 253 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 GPN1Q9HCN4 374 aaPredicted RBP10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 PIPOXQ9P0Z9 390 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 SHPKQ9UHJ6 478 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 KCNS2Q9ULS6 477 aa10.54□□□□□ -0.72
CCDC144CP-203ENST00000580574 TRAV20A0A0B4J274 112 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 TEX13DA0A0J9YY54 714 aaPredicted RBP10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 C3orf85A0A1B0GTC6 90 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 HMX3A6NHT5 357 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 LINC00473A8K010 186 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 LY6LH3BQJ8 138 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 RAB29O14966 203 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 TNFSF12O43508 249 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 CREBL2O60519 120 aaPredicted RBP10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 HLA-AP01891 365 aaKnown RBP10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 OR5AC1P0C628 307 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 IGHV4-31P0DP07 118 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 LINC00205P59089 165 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 RRAS2P62070 204 aaPredicted RBP10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 CBX3Q13185 183 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 KLRD1Q13241 179 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 HLA-DRB5Q30154 266 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 ANKRD55Q3KP44 614 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 BTNL3Q6UXE8 466 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 ZNF66Q6ZN08 573 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 LYG1Q8N1E2 194 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 PNKDQ8N490 385 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 C12orf45Q8N5I9 185 aaPredicted RBP10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 MAPK1IP1LQ8NDC0 245 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 OR4P4Q8NGL7 312 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 OR13D1Q8NGV5 346 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 DDB2Q92466 427 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 MSI2Q96DH6 328 aaKnown RBP10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 HEXA-AS1Q9H8Q6 139 aa10.53□□□□□ -0.72
CCDC144CP-203ENST00000580574 H0Y980 276 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 TOX4O94842 621 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 IFNA2P01563 188 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 SULT1A3P0DMM9 295 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 SULT1A4P0DMN0 295 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 VAMP1P23763 118 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 COX7A1P24310 79 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 UCP1P25874 307 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 PRRX1P54821 245 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 DIAPH2-AS1Q14236 149 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 SLC9A3R2Q15599 337 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 C2orf68Q2NKX9 166 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 TMEM249Q2WGJ8 235 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 SP6Q3SY56 376 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 ZNF585BQ52M93 769 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 FAM71F2Q6NXP2 309 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 LRTM2Q8N967 370 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 LHFPL5Q8TAF8 219 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 TMEM186Q96B77 213 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 TMEM56Q96MV1 263 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 HSD17B10Q99714 261 aaKnown RBP10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 TMEM222Q9H0R3 208 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 PRR13Q9NZ81 148 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 KCNIP3Q9Y2W7 256 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 TMEM56-RWDD3S4R434 201 aa10.52□□□□□ -0.73
CCDC144CP-203ENST00000580574 BUB1B-PAK6H3BSN5 160 aa10.51□□□□□ -0.73
CCDC144CP-203ENST00000580574 TOR1AO14656 332 aa10.51□□□□□ -0.73
CCDC144CP-203ENST00000580574 B3GALNT1O75752 331 aa10.51□□□□□ -0.73
CCDC144CP-203ENST00000580574 CDS2O95674 445 aa10.51□□□□□ -0.73
CCDC144CP-203ENST00000580574 TRAPPC2P0DI81 140 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms