RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 FAM131AQ6UXB0 335 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 Q6ZS49 121 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 PDPNQ86YL7 162 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 OR4A4PQ8NGN8 299 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 OR1N2Q8NGR9 330 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 FAM3DQ96BQ1 224 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 TMEM68Q96MH6 324 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 WWC2-AS2Q96NR7 200 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 TSNAXQ99598 290 aaKnown RBP11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 C11orf54Q9H0W9 315 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 KLK15Q9H2R5 256 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 SLA2Q9H6Q3 261 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 NKX1-2Q9UD57 310 aaPredicted RBP11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 RAB22AQ9UL26 194 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 BLOC1S6Q9UL45 172 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 V9GY05 133 aa11.26□□□□□ -0.61
SMARCE1-216ENST00000580419 TRDCB7Z8K6 153 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 G3V318 75 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 H3BUA1 57 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 ST8SIA5O15466 376 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 HSPA12AO43301 675 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 PROP1O75360 226 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 GSTP1P09211 210 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 RAB6AP20340 208 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 CNTFRP26992 372 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 LGALS7P47929 136 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 ARL6IP1Q15041 203 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 DEFB136Q30KP8 78 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 NRG4Q8WWG1 115 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 TMEM203Q969S6 136 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 CMSS1Q9BQ75 279 aaKnown RBP11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 PARP11Q9NR21 331 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 TPSG1Q9NRR2 321 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 WSB1Q9Y6I7 421 aa11.25□□□□□ -0.61
SMARCE1-216ENST00000580419 PDCD5O14737 125 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 DENRO43583 198 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 TFAP2AP05549 437 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 EGR2P11161 476 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 CALRP27797 417 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 CD40LGP29965 261 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 RPS25P62851 125 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 FABP5Q01469 135 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 C2orf76Q3KRA6 126 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 MOGAT2Q3SYC2 334 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 RPL39P5Q59GN2 51 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 ASPHD1Q5U4P2 390 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 ZNF367Q7RTV3 350 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 ARHGAP5-AS1Q96IT6 56 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 CYYR1Q96J86 154 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 DUX3Q96PT4 197 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 CABLES2Q9BTV7 478 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 PECRQ9BY49 303 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 GNB4Q9HAV0 340 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 ZNF221Q9UK13 617 aa11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 ZNF256Q9Y2P7 627 aaPredicted RBP11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 AK6Q9Y3D8 172 aaKnown RBP11.24□□□□□ -0.61
SMARCE1-216ENST00000580419 SOX15O60248 233 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 APOA2P02652 100 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 LGALS1P09382 135 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 SCTP09683 121 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 HSMCR30P0CW71 290 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 VEGFCP49767 419 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 RAB25P57735 213 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 NDPQ00604 133 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 PSG5Q15238 335 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 SSX1Q16384 188 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 PLAC9Q5JTB6 97 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 C5orf24Q7Z6I8 188 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 ABHD14BQ96IU4 210 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 PARP12Q9H0J9 701 aaKnown RBP11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 FBXL15Q9H469 300 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 NDUFB11Q9NX14 153 aa11.23□□□□□ -0.61
SMARCE1-216ENST00000580419 TRBV6-7A0A0A0MS04 114 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 IGKV1-6A0A0C4DH72 117 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 LINC01619G3V211 115 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 H7C2Y5 167 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 OVOL1O14753 267 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 RRASP10301 218 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 GADD45AP24522 165 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 ZNF260Q3ZCT1 412 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 ACTBL2Q562R1 376 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 SETD6Q8TBK2 473 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 FLYWCH2Q96CP2 140 aaKnown RBP11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 RAB3CQ96E17 227 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 KCNK15Q9H427 330 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 RDH8Q9NYR8 311 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 OR1A1Q9P1Q5 309 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 KCNK7Q9Y2U2 307 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 FBXO7Q9Y3I1 522 aa11.22□□□□□ -0.61
SMARCE1-216ENST00000580419 A0A1W2PN81 502 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 METTL21EPA6NDL7 271 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 IFITM5A6NNB3 132 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 RAB27BO00194 218 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 FABP7O15540 132 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 IGKV1-16P04430 117 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 HSPB1P04792 205 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 CHRNA7P36544 502 aa11.21□□□□□ -0.61
SMARCE1-216ENST00000580419 ECI1P42126 302 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 114.4 ms