RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 Q6ZS49 121 aa19.61■□□□□ 0.73
CDC42EP4-205ENST00000580315 STPG2Q8N412 459 aa19.61■□□□□ 0.73
CDC42EP4-205ENST00000580315 GINS4Q9BRT9 223 aa19.61■□□□□ 0.73
CDC42EP4-205ENST00000580315 TOLLIPQ9H0E2 274 aa19.61■□□□□ 0.73
CDC42EP4-205ENST00000580315 TRBV6-7A0A0A0MS04 114 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 TRIM64CA6NLI5 447 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 RRP9O43818 475 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 GNG2P59768 71 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 PNLIPRP3Q17RR3 467 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 FAM131AQ6UXB0 335 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 ZNF329Q86UD4 541 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 COMMD1Q8N668 190 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 RBMXL1Q96E39 390 aaKnown RBP19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 DCSTAMPQ9H295 470 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 KIAA1456Q9P272 454 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 LINC00527Q9UJ94 153 aa19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 ELF5Q9UKW6 265 aaPredicted RBP19.6■□□□□ 0.73
CDC42EP4-205ENST00000580315 NBR2O15453 112 aa19.59■□□□□ 0.73
CDC42EP4-205ENST00000580315 PF4V1P10720 104 aa19.59■□□□□ 0.73
CDC42EP4-205ENST00000580315 ZNF436-AS1Q8NC38 126 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP4-205ENST00000580315 OR5H6Q8NGV6 325 aa19.59■□□□□ 0.73
CDC42EP4-205ENST00000580315 AURKAIP1Q9NWT8 199 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP4-205ENST00000580315 ZNF107Q9UII5 783 aaPredicted RBP19.59■□□□□ 0.73
CDC42EP4-205ENST00000580315 WASHC3Q9Y3C0 194 aa19.59■□□□□ 0.73
CDC42EP4-205ENST00000580315 A0A0A6YYH2 397 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 TMEM235A6NFC5 223 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 A6NJ64 397 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 LINC01548A6NM66 108 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 H7C2Y5 167 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 LSM3P62310 102 aaKnown RBP19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 ZNF260Q3ZCT1 412 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 GLDNQ6ZMI3 551 aaPredicted RBP19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 OR5AN1Q8NGI8 311 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 RITA1Q96K30 269 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 ST6GALNAC5Q9BVH7 336 aa19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 RBM7Q9Y580 266 aaKnown RBP19.58■□□□□ 0.72
CDC42EP4-205ENST00000580315 DNAH3Q8TD57 4116 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 H0YJW9 148 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 RBBP9O75884 186 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 TFAP2AP05549 437 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 OR8U9P0C7N5 309 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 NPBQ8NG41 125 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 OR8U1Q8NH10 309 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 NUDCD2Q8WVJ2 157 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 SLC25A38Q96DW6 304 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 DIABLOQ9NR28 239 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 SPATA2Q9UM82 520 aa19.57■□□□□ 0.72
CDC42EP4-205ENST00000580315 KMT2CQ8NEZ4 4911 aaKnown RBP19.56■□□□□ 0.72
CDC42EP4-205ENST00000580315 CTXN2P0C2S0 81 aa19.56■□□□□ 0.72
CDC42EP4-205ENST00000580315 CNTFRP26992 372 aa19.56■□□□□ 0.72
CDC42EP4-205ENST00000580315 TGFBR1P36897 503 aa19.56■□□□□ 0.72
CDC42EP4-205ENST00000580315 C5orf64Q2M2E5 130 aa19.56■□□□□ 0.72
CDC42EP4-205ENST00000580315 HSPB9Q9BQS6 159 aa19.56■□□□□ 0.72
CDC42EP4-205ENST00000580315 OR2D2Q9H210 308 aa19.56■□□□□ 0.72
CDC42EP4-205ENST00000580315 TRAV18A0A075B6X5 111 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 M0R1X1 148 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 HLA-DRB1P01911 266 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 APOA2P02652 100 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 VDAC1P21796 283 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 RPS19P39019 145 aaKnown RBP19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 TEX38Q6PEX7 206 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 DRAXINQ8NBI3 349 aaPredicted RBP19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 RNF5Q99942 180 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 ZFP57Q9NU63 452 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 GAB2Q9UQC2 676 aa19.55■□□□□ 0.72
CDC42EP4-205ENST00000580315 IGKV1D-8A0A087WSZ0 117 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 PROP1O75360 226 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 NDUFA3O95167 84 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 PF4P02776 101 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 OR5H8P0DN80 308 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 PLGLAQ15195 96 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 LIN54Q6MZP7 749 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 H1FOOQ8IZA3 346 aaPredicted RBP19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 FUNDC2Q9BWH2 189 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 ZNF580Q9UK33 172 aa19.54■□□□□ 0.72
CDC42EP4-205ENST00000580315 IGF1P05019 195 aa19.53■□□□□ 0.72
CDC42EP4-205ENST00000580315 FOXB2Q5VYV0 432 aa19.53■□□□□ 0.72
CDC42EP4-205ENST00000580315 PDPNQ86YL7 162 aa19.53■□□□□ 0.72
CDC42EP4-205ENST00000580315 RRHO14718 337 aa19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 SSX5O60225 188 aa19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 RPL23AP62750 156 aaKnown RBP19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 CNIH2Q6PI25 160 aa19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 ZNF383Q8NA42 475 aa19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 OR13F1Q8NGS4 319 aa19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 S100A16Q96FQ6 103 aaKnown RBP19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 TSNAXQ99598 290 aaKnown RBP19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 OR51J1Q9H342 316 aa19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 SDHAF2Q9NX18 166 aa19.52■□□□□ 0.72
CDC42EP4-205ENST00000580315 SLC6A1P30531 599 aa19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 RPS16P62249 146 aaKnown RBP19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 TAGLNQ01995 201 aaKnown RBP19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 CBX3Q13185 183 aa19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 CXorf66Q5JRM2 361 aaPredicted RBP19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 UBE2NLQ5JXB2 153 aa19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 WFDC9Q8NEX5 89 aa19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 PARP11Q9NR21 331 aa19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 ANXA10Q9UJ72 324 aa19.51■□□□□ 0.71
CDC42EP4-205ENST00000580315 NUDT19A8MXV4 375 aa19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 ELANEP08246 267 aa19.5■□□□□ 0.71
CDC42EP4-205ENST00000580315 FOXE3Q13461 319 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms