RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 IGKV1D-8A0A087WSZ0 117 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 TCRBV4S1A1TA0A5B7 111 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 AP4M1O00189 453 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 NCS1P62166 190 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 SLC35B1P78383 322 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 OR4F17Q8NGA8 305 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 KCTD12Q96CX2 325 aaKnown RBP18.57■□□□□ 0.56
SNF8-217ENST00000576353 S100A16Q96FQ6 103 aaKnown RBP18.57■□□□□ 0.56
SNF8-217ENST00000576353 NOL4LQ96MY1 436 aaPredicted RBP18.57■□□□□ 0.56
SNF8-217ENST00000576353 OR4F4Q96R69 305 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 WASHC3Q9Y3C0 194 aa18.57■□□□□ 0.56
SNF8-217ENST00000576353 RBM7Q9Y580 266 aaKnown RBP18.57■□□□□ 0.56
SNF8-217ENST00000576353 WNK1Q9H4A3 2382 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 H0YJW9 148 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 H7C2Y5 167 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 NBR2O15453 112 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 SSX5O60225 188 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 PROP1O75360 226 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 RBBP9O75884 186 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 TFAP2AP05549 437 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 VBP1P61758 197 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 TCTEX1D4Q5JR98 221 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 GLDNQ6ZMI3 551 aaPredicted RBP18.56■□□□□ 0.56
SNF8-217ENST00000576353 H1FOOQ8IZA3 346 aaPredicted RBP18.56■□□□□ 0.56
SNF8-217ENST00000576353 STPG2Q8N412 459 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 NPBQ8NG41 125 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 RITA1Q96K30 269 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 GON7Q9BXV9 100 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 KIAA1456Q9P272 454 aa18.56■□□□□ 0.56
SNF8-217ENST00000576353 TSSC4Q9Y5U2 329 aaPredicted RBP18.56■□□□□ 0.56
SNF8-217ENST00000576353 LINC01548A6NM66 108 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 UBE2NLQ5JXB2 153 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 CNIH2Q6PI25 160 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 C10orf99Q6UWK7 81 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 ZNF329Q86UD4 541 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 ANKRD13BQ86YJ7 626 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 COMMD1Q8N668 190 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 SAMD12Q8N8I0 201 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 DRAXINQ8NBI3 349 aaPredicted RBP18.55■□□□□ 0.56
SNF8-217ENST00000576353 RNF5Q99942 180 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 OR2D2Q9H210 308 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 AUNIPQ9H7T9 357 aa18.55■□□□□ 0.56
SNF8-217ENST00000576353 ADARB2-AS1A8MUL3 147 aa18.54■□□□□ 0.56
SNF8-217ENST00000576353 M0R1X1 148 aa18.54■□□□□ 0.56
SNF8-217ENST00000576353 XRCC3O43542 346 aa18.54■□□□□ 0.56
SNF8-217ENST00000576353 R3HDM4Q96D70 268 aa18.54■□□□□ 0.56
SNF8-217ENST00000576353 ZNF107Q9UII5 783 aaPredicted RBP18.54■□□□□ 0.56
SNF8-217ENST00000576353 ANXA10Q9UJ72 324 aa18.54■□□□□ 0.56
SNF8-217ENST00000576353 LINC00527Q9UJ94 153 aa18.54■□□□□ 0.56
SNF8-217ENST00000576353 APOA2P02652 100 aa18.53■□□□□ 0.56
SNF8-217ENST00000576353 CNTFRP26992 372 aa18.53■□□□□ 0.56
SNF8-217ENST00000576353 C5orf64Q2M2E5 130 aa18.53■□□□□ 0.56
SNF8-217ENST00000576353 LIN54Q6MZP7 749 aa18.53■□□□□ 0.56
SNF8-217ENST00000576353 ZNF383Q8NA42 475 aa18.53■□□□□ 0.56
SNF8-217ENST00000576353 HSPB9Q9BQS6 159 aa18.53■□□□□ 0.56
SNF8-217ENST00000576353 SDHAF2Q9NX18 166 aa18.53■□□□□ 0.56
SNF8-217ENST00000576353 A0A1W2PRX2 142 aa18.52■□□□□ 0.56
SNF8-217ENST00000576353 GABARAPO95166 117 aa18.52■□□□□ 0.56
SNF8-217ENST00000576353 NDUFA3O95167 84 aa18.52■□□□□ 0.56
SNF8-217ENST00000576353 HLA-DRB1P01911 266 aa18.52■□□□□ 0.56
SNF8-217ENST00000576353 PDPNQ86YL7 162 aa18.52■□□□□ 0.56
SNF8-217ENST00000576353 ZNF580Q9UK33 172 aa18.52■□□□□ 0.56
SNF8-217ENST00000576353 OR2W1Q9Y3N9 320 aa18.52■□□□□ 0.56
SNF8-217ENST00000576353 VWFP04275 2813 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 RRHO14718 337 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 IGF1P05019 195 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 CBX5P45973 191 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 TAGLNQ01995 201 aaKnown RBP18.51■□□□□ 0.55
SNF8-217ENST00000576353 CTF1Q16619 201 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 KHDC1LQ5JSQ8 128 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 GPR107Q5VW38 600 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 TEX38Q6PEX7 206 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 GPR141Q7Z602 305 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 HOGA1Q86XE5 327 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 BEST4Q8NFU0 473 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 ACOT12Q8WYK0 555 aa18.51■□□□□ 0.55
SNF8-217ENST00000576353 ALDH3B2P48448 385 aa18.5■□□□□ 0.55
SNF8-217ENST00000576353 RORCP51449 518 aa18.5■□□□□ 0.55
SNF8-217ENST00000576353 LUMP51884 338 aaPredicted RBP18.5■□□□□ 0.55
SNF8-217ENST00000576353 ARPC4P59998 168 aa18.5■□□□□ 0.55
SNF8-217ENST00000576353 PLGLAQ15195 96 aa18.5■□□□□ 0.55
SNF8-217ENST00000576353 TMEM69Q5SWH9 247 aa18.5■□□□□ 0.55
SNF8-217ENST00000576353 FLYWCH2Q96CP2 140 aaKnown RBP18.5■□□□□ 0.55
SNF8-217ENST00000576353 CMTM3Q96MX0 182 aa18.5■□□□□ 0.55
SNF8-217ENST00000576353 TSNAXQ99598 290 aaKnown RBP18.5■□□□□ 0.55
SNF8-217ENST00000576353 NAA50Q9GZZ1 169 aaKnown RBP18.5■□□□□ 0.55
SNF8-217ENST00000576353 SLC22A5O76082 557 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 OR5H8P0DN80 308 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 VDAC1P21796 283 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 NFYAP23511 347 aaPredicted RBP18.49■□□□□ 0.55
SNF8-217ENST00000576353 THBS3P49746 956 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 LINC00205P59089 165 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 RPS16P62249 146 aaKnown RBP18.49■□□□□ 0.55
SNF8-217ENST00000576353 ADTRPQ96IZ2 230 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 OR51J1Q9H342 316 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 SLC35D1Q9NTN3 355 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 ZFP57Q9NU63 452 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 COMMD3Q9UBI1 195 aa18.49■□□□□ 0.55
SNF8-217ENST00000576353 HLA-DQB1P01920 261 aa18.48■□□□□ 0.55
SNF8-217ENST00000576353 IGKV1-16P04430 117 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms