RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 CEACAM6P40199 344 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 CRIP2P52943 208 aaPredicted RBP13.58□□□□□ -0.24
SMG6-214ENST00000573827 LINC00205P59089 165 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 CMSS1Q9BQ75 279 aaKnown RBP13.58□□□□□ -0.24
SMG6-214ENST00000573827 GHITMQ9H3K2 345 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 WSB1Q9Y6I7 421 aa13.58□□□□□ -0.24
SMG6-214ENST00000573827 DNAH7Q8WXX0 4024 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 OR5H14A6NHG9 310 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 TRDCB7Z8K6 153 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 FCN1O00602 326 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 SOX15O60248 233 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 ASPHD1Q5U4P2 390 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 SPARTQ8N0X7 666 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 ZNF383Q8NA42 475 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 C4orf3Q8WVX3 66 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 C5orf30Q96GV9 206 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 TNCP24821 2201 aa13.57□□□□□ -0.24
SMG6-214ENST00000573827 RRHO14718 337 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 FCGR3AP08637 254 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 OR5H8P0DN80 308 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 RAB6AP20340 208 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 C22orf42Q6IC83 251 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 LIN54Q6MZP7 749 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 ZNF491Q8N8L2 437 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 OR10R2Q8NGX6 335 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 OR8U1Q8NH10 309 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 EDARADDQ8WWZ3 215 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 RAB3CQ96E17 227 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 CABLES2Q9BTV7 478 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 FBXL15Q9H469 300 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 GNB4Q9HAV0 340 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 RDH8Q9NYR8 311 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 RNF150Q9ULK6 438 aa13.56□□□□□ -0.24
SMG6-214ENST00000573827 TRAV41A0A0B4J266 112 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 I3L521 148 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 PDCD5O14737 125 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 IGKV1-16P04430 117 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 CD3GP09693 182 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 FGF9P31371 208 aaPredicted RBP13.55□□□□□ -0.24
SMG6-214ENST00000573827 MC5RP33032 325 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 CX3CL1P78423 397 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 RUNX1Q01196 453 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 DRAXINQ8NBI3 349 aaPredicted RBP13.55□□□□□ -0.24
SMG6-214ENST00000573827 OR4A4PQ8NGN8 299 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 UBE2E2Q96LR5 201 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 MCRIP2Q9BUT9 160 aaKnown RBP13.55□□□□□ -0.24
SMG6-214ENST00000573827 GPR61Q9BZJ8 451 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 PARP11Q9NR21 331 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 GAB2Q9UQC2 676 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 WASHC3Q9Y3C0 194 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 SORL1Q92673 2214 aa13.55□□□□□ -0.24
SMG6-214ENST00000573827 IGKV1D-8A0A087WSZ0 117 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 TRBV6-7A0A0A0MS04 114 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 FABP7O15540 132 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 RBBP9O75884 186 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 DIRAS3O95661 229 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 HIST1H1DP16402 221 aaKnown RBP13.54□□□□□ -0.24
SMG6-214ENST00000573827 GNB3P16520 340 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 RAB3BP20337 219 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 SSBP2P81877 361 aaPredicted RBP13.54□□□□□ -0.24
SMG6-214ENST00000573827 IGSF11Q5DX21 431 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 ZNF660Q6AZW8 331 aaPredicted RBP13.54□□□□□ -0.24
SMG6-214ENST00000573827 RNF5Q99942 180 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 NUBP2Q9Y5Y2 271 aa13.54□□□□□ -0.24
SMG6-214ENST00000573827 HSPA12AO43301 675 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 GSTT2P0CG29 244 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 GSTT2BP0CG30 244 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 RANBP1P43487 201 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 PSG5Q15238 335 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 Q6ZS49 121 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.53□□□□□ -0.24
SMG6-214ENST00000573827 TXNL4BQ9NX01 149 aaKnown RBP13.53□□□□□ -0.24
SMG6-214ENST00000573827 KIAA1456Q9P272 454 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 ZNF230Q9UIE0 474 aaPredicted RBP13.53□□□□□ -0.24
SMG6-214ENST00000573827 SCOCQ9UIL1 159 aa13.53□□□□□ -0.24
SMG6-214ENST00000573827 ELF5Q9UKW6 265 aaPredicted RBP13.53□□□□□ -0.24
SMG6-214ENST00000573827 MYL9P24844 172 aa13.52□□□□□ -0.25
SMG6-214ENST00000573827 SERPINB10P48595 397 aa13.52□□□□□ -0.25
SMG6-214ENST00000573827 RAB9AP51151 201 aa13.52□□□□□ -0.25
SMG6-214ENST00000573827 LUMP51884 338 aaPredicted RBP13.52□□□□□ -0.25
SMG6-214ENST00000573827 GNB1P62873 340 aa13.52□□□□□ -0.25
SMG6-214ENST00000573827 SRSF7Q16629 238 aaKnown RBP eCLIP13.52□□□□□ -0.25
SMG6-214ENST00000573827 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.52□□□□□ -0.25
SMG6-214ENST00000573827 MAFIPQ8WZ33 124 aa13.52□□□□□ -0.25
SMG6-214ENST00000573827 YTHDF1Q9BYJ9 559 aaKnown RBP13.52□□□□□ -0.25
SMG6-214ENST00000573827 TPSG1Q9NRR2 321 aa13.52□□□□□ -0.25
SMG6-214ENST00000573827 VSIG4Q9Y279 399 aa13.52□□□□□ -0.25
SMG6-214ENST00000573827 RYR3Q15413 4870 aa13.51□□□□□ -0.25
SMG6-214ENST00000573827 SMIM30A4D0T7 59 aa13.51□□□□□ -0.25
SMG6-214ENST00000573827 IGLV2-23P01705 113 aa13.51□□□□□ -0.25
SMG6-214ENST00000573827 TFAP2AP05549 437 aa13.51□□□□□ -0.25
SMG6-214ENST00000573827 CRYGBP07316 175 aa13.51□□□□□ -0.25
SMG6-214ENST00000573827 OR11H1Q8NG94 326 aa13.51□□□□□ -0.25
SMG6-214ENST00000573827 SDHAF2Q9NX18 166 aa13.51□□□□□ -0.25
SMG6-214ENST00000573827 NOTOA8MTQ0 251 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 H7C2Y5 167 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 SPDEFO95238 335 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 GSTP1P09211 210 aaKnown RBP13.5□□□□□ -0.25
SMG6-214ENST00000573827 PSMB9P28065 219 aa13.5□□□□□ -0.25
SMG6-214ENST00000573827 ECSCRQ19T08 205 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms