RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 TCTEX1D1Q8N7M0 179 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ZNF491Q8N8L2 437 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 OR4A4PQ8NGN8 299 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 OR5M8Q8NGP6 311 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 SETD6Q8TBK2 473 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CNBD2Q96M20 576 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CABLES2Q9BTV7 478 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 OR1A1Q9P1Q5 309 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 GAB2Q9UQC2 676 aa13.32□□□□□ -0.28
MAP1LC3B-208ENST00000570189 TRAV41A0A0B4J266 112 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 SHISA3A0PJX4 238 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 HSPA12AO43301 675 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RAMP3O60896 148 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 SPDEFO95238 335 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 SCTP09683 121 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 HOXD3P31249 432 aaPredicted RBP13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 SRSF7Q16629 238 aaKnown RBP eCLIP13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 UBE2UQ5VVX9 321 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ABHD14BQ96IU4 210 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CENPOQ9BU64 300 aa13.31□□□□□ -0.28
MAP1LC3B-208ENST00000570189 G3V318 75 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RAB27BO00194 218 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 MFNGO00587 321 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 NDPQ00604 133 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 DEFB136Q30KP8 78 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 C9orf66Q5T8R8 295 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 TMEM65Q6PI78 240 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 Q6ZS49 121 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 OR10R2Q8NGX6 335 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RAB3CQ96E17 227 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 DUX3Q96PT4 197 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 PARP11Q9NR21 331 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 VSIG4Q9Y279 399 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 NUBP2Q9Y5Y2 271 aa13.3□□□□□ -0.28
MAP1LC3B-208ENST00000570189 DNAH9Q9NYC9 4486 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FCGR3AP08637 254 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CD3GP09693 182 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 OR8U8P0C7N1 319 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RAB3BP20337 219 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 GADD45AP24522 165 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 MYL9P24844 172 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FGF9P31371 208 aaPredicted RBP13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RAB9AP51151 201 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 DGCR2P98153 550 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 PLA2G7Q13093 441 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 HES5Q5TA89 166 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 PYHIN1Q6K0P9 492 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 PDPNQ86YL7 162 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 YTHDF1Q9BYJ9 559 aaKnown RBP13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 KLK15Q9H2R5 256 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 RDH8Q9NYR8 311 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ZNF221Q9UK13 617 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 WSB1Q9Y6I7 421 aa13.29□□□□□ -0.28
MAP1LC3B-208ENST00000570189 TRBV6-7A0A0A0MS04 114 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FABP7O15540 132 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 TFAP2AP05549 437 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 INSL3P51460 131 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 LUMP51884 338 aaPredicted RBP13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 OR10A3P58181 314 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 CX3CL1P78423 397 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 MRPS15P82914 257 aaKnown RBP13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ARL6IP1Q15041 203 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 MOGAT2Q3SYC2 334 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 AKIRIN2Q53H80 203 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ZNF562Q6V9R5 426 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 GLDNQ6ZMI3 551 aaPredicted RBP13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 ZNF383Q8NA42 475 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 OR11H1Q8NG94 326 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FCGR1BQ92637 280 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 B9D2Q9BPU9 175 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FBXL15Q9H469 300 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FOXA2Q9Y261 457 aaPredicted RBP13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 FBXO7Q9Y3I1 522 aa13.28□□□□□ -0.28
MAP1LC3B-208ENST00000570189 METTL21EPA6NDL7 271 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 H7C2Y5 167 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SOX15O60248 233 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ATP6V1G2O95670 118 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 GSTP1P09211 210 aaKnown RBP13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 EGR2P11161 476 aaPredicted RBP13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 HIST1H1DP16402 221 aaKnown RBP13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TAGLNQ01995 201 aaKnown RBP13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ZNF616Q08AN1 781 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TMEM267Q0VDI3 215 aaPredicted RBP13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 PSG5Q15238 335 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 ASPHD1Q5U4P2 390 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 NR2C2APQ86WQ0 139 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TSNAXQ99598 290 aaKnown RBP13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 GNB4Q9HAV0 340 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SCOCQ9UIL1 159 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 RNF150Q9ULK6 438 aa13.27□□□□□ -0.29
MAP1LC3B-208ENST00000570189 FCN1O00602 326 aa13.26□□□□□ -0.29
MAP1LC3B-208ENST00000570189 APOA2P02652 100 aa13.26□□□□□ -0.29
MAP1LC3B-208ENST00000570189 IGKV1-16P04430 117 aa13.26□□□□□ -0.29
MAP1LC3B-208ENST00000570189 TPRA1Q86W33 373 aa13.26□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SPARTQ8N0X7 666 aa13.26□□□□□ -0.29
MAP1LC3B-208ENST00000570189 OR1N2Q8NGR9 330 aa13.26□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SORL1Q92673 2214 aa13.26□□□□□ -0.29
MAP1LC3B-208ENST00000570189 SEC14L6B5MCN3 397 aa13.25□□□□□ -0.29
MAP1LC3B-208ENST00000570189 DTYMKP23919 212 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms