RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 SAA2-SAA4A0A096LPE2 208 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 IGKV1-6A0A0C4DH72 117 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 TMEM235A6NFC5 223 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 HSPA12AO43301 675 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 SAA2P0DJI9 122 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 DTYMKP23919 212 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 CNTFRP26992 372 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 TALDO1P37837 337 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 PITPNAQ00169 270 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 KIR2DS1Q14954 304 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 PNLIPRP3Q17RR3 467 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 GLDNQ6ZMI3 551 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 SAMD12Q8N8I0 201 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 OR4A4PQ8NGN8 299 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 PHF21AQ96BD5 680 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 S100A16Q96FQ6 103 aaKnown RBP10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 ABHD14BQ96IU4 210 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 CMTM3Q96MX0 182 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 NABP2Q9BQ15 211 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 HSPB9Q9BQS6 159 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 PLSCR3Q9NRY6 295 aa10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 ZNF230Q9UIE0 474 aaPredicted RBP10.75□□□□□ -0.69
VPS9D1-204ENST00000565023 AP4M1O00189 453 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 ITGB1BP1O14713 200 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 FABP7O15540 132 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 XRCC3O43542 346 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 SSX5O60225 188 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 DIRAS3O95661 229 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 ZNF182P17025 639 aaPredicted RBP10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 ZBTB25P24278 435 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 ACTBP60709 375 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 SPCS2Q15005 226 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 RPL39P5Q59GN2 51 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 C8orf86Q6ZUL3 223 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 KLHL30-AS1Q8NEE0 82 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 NUDCD2Q8WVJ2 157 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 RITA1Q96K30 269 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 ZNF251Q9BRH9 671 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 CABLES2Q9BTV7 478 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 TOLLIPQ9H0E2 274 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 IFI27L2Q9H2X8 130 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 AUNIPQ9H7T9 357 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 COMMD3Q9UBI1 195 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 RNF150Q9ULK6 438 aa10.74□□□□□ -0.69
VPS9D1-204ENST00000565023 APOA1P02647 267 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 GSTT2P0CG29 244 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 GSTT2BP0CG30 244 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 SOX6P35712 828 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 CEACAM6P40199 344 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 GNG2P59768 71 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 RPL23AP62750 156 aaKnown RBP10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 ZNF833PQ6ZTB9 187 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 MAFIPQ8WZ33 124 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 AP3S1Q92572 193 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 DUX3Q96PT4 197 aa10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 ZNF107Q9UII5 783 aaPredicted RBP10.73□□□□□ -0.69
VPS9D1-204ENST00000565023 IGKV1D-8A0A087WSZ0 117 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 RPLP1P05386 114 aaKnown RBP10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 EIF4EP06730 217 aaKnown RBP10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 VDAC1P21796 283 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 RAB25P57735 213 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 FAM131AQ6UXB0 335 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 FAM71E2Q8N5Q1 922 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 OR8H1Q8NGG4 311 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 EDARADDQ8WWZ3 215 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 ISOC1Q96CN7 298 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 AGMATQ9BSE5 352 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 C11orf54Q9H0W9 315 aaPredicted RBP10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 PARP11Q9NR21 331 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 PIPOXQ9P0Z9 390 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 CEPT1Q9Y6K0 416 aa10.72□□□□□ -0.69
VPS9D1-204ENST00000565023 TRBV6-7A0A0A0MS04 114 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 H3BMQ9 156 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 H7C2Y5 167 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 RAB29O14966 203 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 NBR2O15453 112 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 HPGDSO60760 199 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 ELK1P19419 428 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 IGSF11Q5DX21 431 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 CXorf66Q5JRM2 361 aaPredicted RBP10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 TMEM69Q5SWH9 247 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 FOXB2Q5VYV0 432 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 MZT2AQ6P582 158 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 TEX38Q6PEX7 206 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 ETV3LQ6ZN32 361 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 DRAXINQ8NBI3 349 aaPredicted RBP10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 DYNC2LI1Q8TCX1 351 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 MRAPQ8TCY5 172 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 ST6GALNAC5Q9BVH7 336 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 GHITMQ9H3K2 345 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 RDH8Q9NYR8 311 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 KIAA1456Q9P272 454 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 WSB1Q9Y6I7 421 aa10.71□□□□□ -0.69
VPS9D1-204ENST00000565023 BET1O15155 118 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 NOL3O60936 208 aaKnown RBP10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 HLA-DQB1P01920 261 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 CT45A6P0DMU7 189 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 CT45A5P0DMU8 189 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 CT45A7P0DMV0 189 aa10.7□□□□□ -0.7
VPS9D1-204ENST00000565023 PTHLHP12272 177 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms