RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 IL36GQ9NZH8 169 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 ST3GAL6Q9Y274 331 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 A3GALT2U3KPV4 340 aa7.82□□□□□ -1.16
SF3B3-204ENST00000563739 ZNF785A8K8V0 405 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 H3BMQ9 156 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 ARPC1BO15143 372 aaKnown RBP7.81□□□□□ -1.16
SF3B3-204ENST00000563739 NOL3O60936 208 aaKnown RBP7.81□□□□□ -1.16
SF3B3-204ENST00000563739 OR7C1O76099 320 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-204ENST00000563739 CD2P06729 351 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 FSTP19883 344 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 PRR20EP86478 221 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 PRR20CP86479 221 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 PRR20DP86480 221 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 PRR20BP86481 221 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 PRR20AP86496 221 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 DYRK1AQ13627 763 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 Q499Y3 187 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 MORN2Q502X0 79 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 ZNF660Q6AZW8 331 aaPredicted RBP7.81□□□□□ -1.16
SF3B3-204ENST00000563739 LIN54Q6MZP7 749 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 FAM131AQ6UXB0 335 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 ZNF367Q7RTV3 350 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 ANKRD13BQ86YJ7 626 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 SERPINA12Q8IW75 414 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 DEFB125Q8N687 156 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 OR52L2PQ8NGH6 319 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 OR9G4Q8NGQ1 327 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 OR4K15Q8NH41 348 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 IL17DQ8TAD2 202 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 RAB2BQ8WUD1 216 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 DDB2Q92466 427 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 UFD1Q92890 307 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 YIPF6Q96EC8 236 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 BCL7BQ9BQE9 202 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 PARP12Q9H0J9 701 aaKnown RBP7.81□□□□□ -1.16
SF3B3-204ENST00000563739 IFI27L2Q9H2X8 130 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 TAS2R4Q9NYW5 299 aa7.81□□□□□ -1.16
SF3B3-204ENST00000563739 SAA2-SAA4A0A096LPE2 208 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 TRBV5-7A0A0A0MS05 114 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 SHISA3A0PJX4 238 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 AIPO00170 330 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 RRHO14718 337 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 SC5DO75845 299 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 HTR3BO95264 441 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 OCMP0CE72 109 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-204ENST00000563739 SAA2P0DJI9 122 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-204ENST00000563739 PPP1CCP36873 323 aaKnown RBP7.8□□□□□ -1.16
SF3B3-204ENST00000563739 SYNJ2BPP57105 145 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 TPPP2P59282 170 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 MLLT11Q13015 90 aaPredicted RBP7.8□□□□□ -1.16
SF3B3-204ENST00000563739 LIPKQ5VXJ0 399 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 SIGIRRQ6IA17 410 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 TCTEX1D1Q8N7M0 179 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 LFNGQ8NES3 379 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 OR5D14Q8NGL3 314 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 GATAD1Q8WUU5 269 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 FLYWCH2Q96CP2 140 aaKnown RBP7.8□□□□□ -1.16
SF3B3-204ENST00000563739 ORAI1Q96D31 301 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 OR14A2Q96R54 314 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 OVOL2Q9BRP0 275 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 ABHD14AQ9BUJ0 271 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 FUNDC2Q9BWH2 189 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 CST11Q9H112 138 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 MBNL3Q9NUK0 354 aaKnown RBP7.8□□□□□ -1.16
SF3B3-204ENST00000563739 SIGLEC8Q9NYZ4 499 aa7.8□□□□□ -1.16
SF3B3-204ENST00000563739 MUC4Q99102 2169 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 PROP1O75360 226 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 HSMCR30P0CW71 290 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 RAB3AP20336 220 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 MAPK3P27361 379 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-204ENST00000563739 PSMB9P28065 219 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 PPP3R1P63098 170 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 TPBGQ13641 420 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 MRGPRG-AS1Q2M3A8 158 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 STEAP3Q658P3 488 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 PPP1R27Q86WC6 154 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 THRSPQ92748 146 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 CPNE2Q96FN4 548 aaPredicted RBP7.79□□□□□ -1.16
SF3B3-204ENST00000563739 DERL3Q96Q80 235 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 MGLLQ99685 303 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 ST6GALNAC5Q9BVH7 336 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 ELOVL1Q9BW60 279 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 KRTAP4-5Q9BYR2 181 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 GNG12Q9UBI6 72 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 CKLFQ9UBR5 152 aa7.79□□□□□ -1.16
SF3B3-204ENST00000563739 TRAV8-7A0A075B6U6 113 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 ANKRD34BA5PLL1 514 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 GPX5O75715 221 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 GABARAPO95166 117 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 TRGV3P03979 118 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 CT45A6P0DMU7 189 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 CT45A5P0DMU8 189 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 CT45A7P0DMV0 189 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 CPEP16870 476 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 IGFBP3P17936 291 aaPredicted RBP7.78□□□□□ -1.16
SF3B3-204ENST00000563739 CD81P60033 236 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 RPS25P62851 125 aaKnown RBP7.78□□□□□ -1.16
SF3B3-204ENST00000563739 PMS2P11Q13670 270 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 RSU1Q15404 277 aa7.78□□□□□ -1.16
SF3B3-204ENST00000563739 CTF1Q16619 201 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms