RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 OR8U1Q8NH10 309 aa12.07□□□□□ -0.48
SNRPA1-213ENST00000560856 PHF21AQ96BD5 680 aa12.07□□□□□ -0.48
SNRPA1-213ENST00000560856 S100A16Q96FQ6 103 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-213ENST00000560856 LIN7CQ9NUP9 197 aaKnown RBP12.07□□□□□ -0.48
SNRPA1-213ENST00000560856 PLXNB1O43157 2135 aa12.07□□□□□ -0.48
SNRPA1-213ENST00000560856 TET2Q6N021 2002 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 FBXO24O75426 580 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 TSPAN15O95858 294 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 EIF4EP06730 217 aaKnown RBP12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 GPR12P47775 334 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 CD83Q01151 205 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 TREML4Q6UXN2 200 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 HOGA1Q86XE5 327 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 DRAXINQ8NBI3 349 aaPredicted RBP12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 NPBQ8NG41 125 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 CMTM3Q96MX0 182 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 SDHAF2Q9NX18 166 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 COMMD3Q9UBI1 195 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 ANXA10Q9UJ72 324 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 ZNF221Q9UK13 617 aa12.06□□□□□ -0.48
SNRPA1-213ENST00000560856 OR5H14A6NHG9 310 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 M0QZ24 198 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 NDUFA3O95167 84 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 CTXN2P0C2S0 81 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 RORCP51449 518 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 TAS2R20P59543 309 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 SLC35E3Q7Z769 313 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 CENPVQ7Z7K6 275 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 ACOT12Q8WYK0 555 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 SNAPC3Q92966 411 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 NOL4LQ96MY1 436 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 CITED2Q99967 270 aaPredicted RBP12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 HSPB9Q9BQS6 159 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 GINS4Q9BRT9 223 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 OR2D2Q9H210 308 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 ANAPC10Q9UM13 185 aa12.05□□□□□ -0.48
SNRPA1-213ENST00000560856 M0R1X1 148 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 PEX14O75381 377 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 TUSC2O75896 110 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 HLA-DQB1P01920 261 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 APOA1P02647 267 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 NFYAP23511 347 aaPredicted RBP12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 MC5RP33032 325 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 RPL5P46777 297 aaKnown RBP12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 SPCS2Q15005 226 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 MMDQ15546 238 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 BEST4Q8NFU0 473 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 RASL11BQ9BPW5 248 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 LINC00527Q9UJ94 153 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 WASHC3Q9Y3C0 194 aa12.04□□□□□ -0.48
SNRPA1-213ENST00000560856 IGKV1D-13A0A0B4J2D9 117 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 NBR2O15453 112 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 HPGDSO60760 199 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 IGKV1-16P04430 117 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 IGKV1-13P0DP09 117 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 ZNF182P17025 639 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 ELK1P19419 428 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 C5orf64Q2M2E5 130 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 C2orf68Q2NKX9 166 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 TMEM69Q5SWH9 247 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 ZNF329Q86UD4 541 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 NDUFA11Q86Y39 141 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 CLVS1Q8IUQ0 354 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 RNF5Q99942 180 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 ZNF107Q9UII5 783 aaPredicted RBP12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 OR2W1Q9Y3N9 320 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 NOTCH3Q9UM47 2321 aa12.03□□□□□ -0.48
SNRPA1-213ENST00000560856 RBBP9O75884 186 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 IGLV2-14P01704 120 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 HLA-DRB1P01911 266 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 FCER2P06734 321 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 CSF1P09603 554 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 NAT1P18440 290 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 SOX6P35712 828 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 CBX5P45973 191 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 STPG2Q8N412 459 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 CHPT1Q8WUD6 406 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 DDB2Q92466 427 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 MMP27Q9H306 513 aa12.02□□□□□ -0.49
SNRPA1-213ENST00000560856 IGHV7-81A0A0B4J1V7 117 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 PSMB11A5LHX3 300 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 MEIS3P1A6NDR6 274 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 H7C2Y5 167 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 J3QRK9 145 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 AP4M1O00189 453 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 RRHO14718 337 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 KCNAB3O43448 404 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 DUTP33316 252 aaKnown RBP12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 TMBIM6P55061 237 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 CFHR3Q02985 330 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 NSUN5P1Q3KNT7 163 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 GPX8Q8TED1 209 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 RAB2BQ8WUD1 216 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 BCL7BQ9BQE9 202 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 ZNF580Q9UK33 172 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 NOTCH1P46531 2555 aa12.01□□□□□ -0.49
SNRPA1-213ENST00000560856 LINC00473A8K010 186 aa12□□□□□ -0.49
SNRPA1-213ENST00000560856 FCN1O00602 326 aa12□□□□□ -0.49
SNRPA1-213ENST00000560856 IGF1P05019 195 aa12□□□□□ -0.49
SNRPA1-213ENST00000560856 PRSS3P35030 304 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms