RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 DPF1Q92782 380 aa13.27□□□□□ -0.29
LRRC28-210ENST00000558879 PARP11Q9NR21 331 aa13.27□□□□□ -0.29
LRRC28-210ENST00000558879 KIAA1456Q9P272 454 aa13.27□□□□□ -0.29
LRRC28-210ENST00000558879 FBXO7Q9Y3I1 522 aa13.27□□□□□ -0.29
LRRC28-210ENST00000558879 TRDCB7Z8K6 153 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 RAB27BO00194 218 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 HSPA12AO43301 675 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 RBBP9O75884 186 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 FCGR3AP08637 254 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 RAB3BP20337 219 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 RAB6AP20340 208 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 MYL9P24844 172 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 MC5RP33032 325 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 CEACAM6P40199 344 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 LIN54Q6MZP7 749 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 MINDY2Q8NBR6 621 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 OR4A4PQ8NGN8 299 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 FBXL15Q9H469 300 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 WASHC3Q9Y3C0 194 aa13.26□□□□□ -0.29
LRRC28-210ENST00000558879 TNCP24821 2201 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 TRAV41A0A0B4J266 112 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 DIRAS3O95661 229 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 RUNX1Q01196 453 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 ZNF491Q8N8L2 437 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 OR10R2Q8NGX6 335 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 RAB3CQ96E17 227 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 UBE2E2Q96LR5 201 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 RNF5Q99942 180 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 RDH8Q9NYR8 311 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 WSB1Q9Y6I7 421 aa13.25□□□□□ -0.29
LRRC28-210ENST00000558879 SORL1Q92673 2214 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 I3L521 148 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 FABP7O15540 132 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 SOX15O60248 233 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 SPDEFO95238 335 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 CD3GP09693 182 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 HIST1H1DP16402 221 aaKnown RBP13.24□□□□□ -0.29
LRRC28-210ENST00000558879 FGF9P31371 208 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-210ENST00000558879 SERPINB10P48595 397 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 ASPHD1Q5U4P2 390 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 ZNF660Q6AZW8 331 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-210ENST00000558879 C22orf42Q6IC83 251 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 SPARTQ8N0X7 666 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 ZNF383Q8NA42 475 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.24□□□□□ -0.29
LRRC28-210ENST00000558879 OR5M8Q8NGP6 311 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 KLK15Q9H2R5 256 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 GNB4Q9HAV0 340 aa13.24□□□□□ -0.29
LRRC28-210ENST00000558879 A0A0B4J203 849 aa13.23□□□□□ -0.29
LRRC28-210ENST00000558879 IGKV1-16P04430 117 aa13.23□□□□□ -0.29
LRRC28-210ENST00000558879 GADD45AP24522 165 aa13.23□□□□□ -0.29
LRRC28-210ENST00000558879 CX3CL1P78423 397 aa13.23□□□□□ -0.29
LRRC28-210ENST00000558879 PDPNQ86YL7 162 aa13.23□□□□□ -0.29
LRRC28-210ENST00000558879 TCTEX1D1Q8N7M0 179 aa13.23□□□□□ -0.29
LRRC28-210ENST00000558879 FCGR1BQ92637 280 aa13.23□□□□□ -0.29
LRRC28-210ENST00000558879 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.23□□□□□ -0.29
LRRC28-210ENST00000558879 TRBV6-7A0A0A0MS04 114 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 H7C2Y5 167 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 TFAP2AP05549 437 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 EGR2P11161 476 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-210ENST00000558879 GNB3P16520 340 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 LUMP51884 338 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-210ENST00000558879 RAB25P57735 213 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 LINC00205P59089 165 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 MRPS15P82914 257 aaKnown RBP13.22□□□□□ -0.29
LRRC28-210ENST00000558879 SRSF7Q16629 238 aaKnown RBP eCLIP13.22□□□□□ -0.29
LRRC28-210ENST00000558879 ECSCRQ19T08 205 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 IGSF11Q5DX21 431 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 Q6ZS49 121 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 DRAXINQ8NBI3 349 aaPredicted RBP13.22□□□□□ -0.29
LRRC28-210ENST00000558879 C5orf30Q96GV9 206 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 TXNL4BQ9NX01 149 aaKnown RBP13.22□□□□□ -0.29
LRRC28-210ENST00000558879 ZNF221Q9UK13 617 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 RNF150Q9ULK6 438 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 GAB2Q9UQC2 676 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 VSIG4Q9Y279 399 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 NUBP2Q9Y5Y2 271 aa13.22□□□□□ -0.29
LRRC28-210ENST00000558879 A0A1W2PN81 502 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 FCN1O00602 326 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 GSTP1P09211 210 aaKnown RBP13.21□□□□□ -0.29
LRRC28-210ENST00000558879 GSTT2P0CG29 244 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 GSTT2BP0CG30 244 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 SNRPBP14678 240 aaKnown RBP13.21□□□□□ -0.29
LRRC28-210ENST00000558879 PSMB9P28065 219 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 CHRNA7P36544 502 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 RAB9AP51151 201 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 GNB1P62873 340 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 PSG5Q15238 335 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 C9orf66Q5T8R8 295 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 TMEM65Q6PI78 240 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 OR11H1Q8NG94 326 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 YTHDF1Q9BYJ9 559 aaKnown RBP13.21□□□□□ -0.29
LRRC28-210ENST00000558879 OR2D2Q9H210 308 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 Q9H521 79 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 STUB1Q9UNE7 303 aa13.21□□□□□ -0.29
LRRC28-210ENST00000558879 FOXA2Q9Y261 457 aaPredicted RBP13.21□□□□□ -0.29
LRRC28-210ENST00000558879 SMIM30A4D0T7 59 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 METTL21EPA6NDL7 271 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 NOTOA8MTQ0 251 aa13.2□□□□□ -0.3
LRRC28-210ENST00000558879 M0R1X1 148 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms