RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 CMTM3Q96MX0 182 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 RASL11BQ9BPW5 248 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 ZNF251Q9BRH9 671 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 GAB2Q9UQC2 676 aa9.92□□□□□ -0.82
SLIRP-211ENST00000557623 RBM7Q9Y580 266 aaKnown RBP9.92□□□□□ -0.82
SLIRP-211ENST00000557623 SH2D7A6NKC9 451 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-211ENST00000557623 TFAP2AP05549 437 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 CT45A6P0DMU7 189 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 CT45A5P0DMU8 189 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 CT45A7P0DMV0 189 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 CBX5P45973 191 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 CTF1Q16619 201 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 CNIH2Q6PI25 160 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 SLC35E3Q7Z769 313 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 FOXRED2Q8IWF2 684 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 OR5AU1Q8NGC0 362 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 WIPF2Q8TF74 440 aaPredicted RBP9.91□□□□□ -0.82
SLIRP-211ENST00000557623 AUNIPQ9H7T9 357 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 PLSCR3Q9NRY6 295 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 RNF150Q9ULK6 438 aa9.91□□□□□ -0.82
SLIRP-211ENST00000557623 IGKV1D-8A0A087WSZ0 117 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 A6NHS1 94 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 KCNAB3O43448 404 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 SSX5O60225 188 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 IGHG2P01859 326 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 CSF1P09603 554 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 OR8U9P0C7N5 309 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 F2RL1P55085 397 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 ACTBP60709 375 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 MMDQ15546 238 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 TMEM69Q5SWH9 247 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 MZT2AQ6P582 158 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 FAM131AQ6UXB0 335 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 H1FOOQ8IZA3 346 aaPredicted RBP9.9□□□□□ -0.82
SLIRP-211ENST00000557623 C11orf44Q8N8P7 122 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 OR4X2Q8NGF9 303 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 OR5AN1Q8NGI8 311 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 OR8U1Q8NH10 309 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 CHPT1Q8WUD6 406 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 AP3S1Q92572 193 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 RNF5Q99942 180 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 NAA50Q9GZZ1 169 aaKnown RBP9.9□□□□□ -0.82
SLIRP-211ENST00000557623 OR2D2Q9H210 308 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 KIAA1456Q9P272 454 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 COMMD3Q9UBI1 195 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 ANXA10Q9UJ72 324 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 WASHC3Q9Y3C0 194 aa9.9□□□□□ -0.82
SLIRP-211ENST00000557623 SMIM31A0A1B0GVY4 71 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 H0YJW9 148 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 H7C2Y5 167 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 NBR2O15453 112 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 RBBP9O75884 186 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 APOA1P02647 267 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 APOA2P02652 100 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 CD28P10747 220 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 SOX6P35712 828 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 ARPC4P59998 168 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 TAGLNQ01995 201 aaKnown RBP9.89□□□□□ -0.83
SLIRP-211ENST00000557623 HOGA1Q86XE5 327 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 NDUFA11Q86Y39 141 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 FAM71E2Q8N5Q1 922 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 BEST4Q8NFU0 473 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 NPBQ8NG41 125 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 BCL7BQ9BQE9 202 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 GON7Q9BXV9 100 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 MMP27Q9H306 513 aa9.89□□□□□ -0.83
SLIRP-211ENST00000557623 PSMB11A5LHX3 300 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 M0R1X1 148 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 AP4M1O00189 453 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 PROP1O75360 226 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 SLC22A5O76082 557 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 OPN1MWP04001 364 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 OPN1MW2P0DN77 364 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 OPN1MW3P0DN78 364 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 ZNF182P17025 639 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-211ENST00000557623 RPL5P46777 297 aaKnown RBP9.88□□□□□ -0.83
SLIRP-211ENST00000557623 LUMP51884 338 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-211ENST00000557623 TAS2R20P59543 309 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 SLC35B1P78383 322 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 GLDNQ6ZMI3 551 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-211ENST00000557623 PDPNQ86YL7 162 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 CLVS1Q8IUQ0 354 aaPredicted RBP9.88□□□□□ -0.83
SLIRP-211ENST00000557623 COMMD1Q8N668 190 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 RAB2BQ8WUD1 216 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 ADTRPQ96IZ2 230 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 IFT46Q9NQC8 304 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 SDHAF2Q9NX18 166 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 OR2W1Q9Y3N9 320 aa9.88□□□□□ -0.83
SLIRP-211ENST00000557623 NOL3O60936 208 aaKnown RBP9.87□□□□□ -0.83
SLIRP-211ENST00000557623 NDUFA3O95167 84 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 EIF4EP06730 217 aaKnown RBP9.87□□□□□ -0.83
SLIRP-211ENST00000557623 THBS3P49746 956 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 TMBIM6P55061 237 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 CD83Q01151 205 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 CBX3Q13185 183 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 STPG2Q8N412 459 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 ZNF645Q8N7E2 425 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 GVQW1Q8N7I0 195 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 ZNF383Q8NA42 475 aa9.87□□□□□ -0.83
SLIRP-211ENST00000557623 DRAXINQ8NBI3 349 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms