RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 TRBV6-7A0A0A0MS04 114 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 A0A0A6YYH2 397 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 TMEM235A6NFC5 223 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 A6NJ64 397 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 AP4M1O00189 453 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 BET1O15155 118 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 GSTT2P0CG29 244 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 GSTT2BP0CG30 244 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 CT45A6P0DMU7 189 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 CT45A5P0DMU8 189 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 CT45A7P0DMV0 189 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 F2RL1P55085 397 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 ACTBP60709 375 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 PITPNAQ00169 270 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 PNLIPRP3Q17RR3 467 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 IGSF11Q5DX21 431 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 TCTEX1D4Q5JR98 221 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 C10orf99Q6UWK7 81 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 FAM131AQ6UXB0 335 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.11□□□□□ -0.95
SLIRP-205ENST00000556310 OR4F17Q8NGA8 305 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 OR5H6Q8NGV6 325 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 OR10J5Q8NHC4 309 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 PHF21AQ96BD5 680 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 NOL4LQ96MY1 436 aaPredicted RBP9.11□□□□□ -0.95
SLIRP-205ENST00000556310 OR4F4Q96R69 305 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF221Q9UK13 617 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 ELF5Q9UKW6 265 aaPredicted RBP9.11□□□□□ -0.95
SLIRP-205ENST00000556310 TSSC4Q9Y5U2 329 aaPredicted RBP9.11□□□□□ -0.95
SLIRP-205ENST00000556310 PLXNB1O43157 2135 aa9.11□□□□□ -0.95
SLIRP-205ENST00000556310 H0YJW9 148 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 NBR2O15453 112 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 SMIM18P0DKX4 95 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 SOX6P35712 828 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 TGFBR1P36897 503 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 GNG2P59768 71 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 SLC35B1P78383 322 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF260Q3ZCT1 412 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 STPG2Q8N412 459 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 OR5AN1Q8NGI8 311 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 OR13F1Q8NGS4 319 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 NUDCD2Q8WVJ2 157 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 R3HDM4Q96D70 268 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 RBMXL1Q96E39 390 aaKnown RBP9.1□□□□□ -0.95
SLIRP-205ENST00000556310 GINS4Q9BRT9 223 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 DCSTAMPQ9H295 470 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF580Q9UK33 172 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 SPATA2Q9UM82 520 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 WASHC3Q9Y3C0 194 aa9.1□□□□□ -0.95
SLIRP-205ENST00000556310 IGKV1D-8A0A087WSZ0 117 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 A0A1W2PRX2 142 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 TCRBV4S1A1TA0A5B7 111 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 PROP1O75360 226 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 RBBP9O75884 186 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 NDUFA3O95167 84 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 HLA-DRB1P01911 266 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 TFAP2AP05549 437 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 MC5RP33032 325 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 RPS19P39019 145 aaKnown RBP9.09□□□□□ -0.95
SLIRP-205ENST00000556310 LSM3P62310 102 aaKnown RBP9.09□□□□□ -0.95
SLIRP-205ENST00000556310 C5orf64Q2M2E5 130 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 KHDC1LQ5JSQ8 128 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 GLDNQ6ZMI3 551 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF329Q86UD4 541 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 COMMD1Q8N668 190 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 NPBQ8NG41 125 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 HSPB9Q9BQS6 159 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 FUNDC2Q9BWH2 189 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 GON7Q9BXV9 100 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 OR2D2Q9H210 308 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 KIAA1456Q9P272 454 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 ZNF107Q9UII5 783 aaPredicted RBP9.09□□□□□ -0.95
SLIRP-205ENST00000556310 LINC00527Q9UJ94 153 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 RNF150Q9ULK6 438 aa9.09□□□□□ -0.95
SLIRP-205ENST00000556310 NOTCH3Q9UM47 2321 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 TRAV18A0A075B6X5 111 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 LINC01548A6NM66 108 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 H7C2Y5 167 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 SSX5O60225 188 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 APOA2P02652 100 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 CTXN2P0C2S0 81 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 OR8U9P0C7N5 309 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 CNTFRP26992 372 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 NCS1P62166 190 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 PDPNQ86YL7 162 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 H1FOOQ8IZA3 346 aaPredicted RBP9.08□□□□□ -0.96
SLIRP-205ENST00000556310 OR8U1Q8NH10 309 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 SLC25A46Q96AG3 418 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 RITA1Q96K30 269 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 RNF5Q99942 180 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 RSRP1Q9BUV0 290 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 DIABLOQ9NR28 239 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 GAB2Q9UQC2 676 aa9.08□□□□□ -0.96
SLIRP-205ENST00000556310 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
SLIRP-205ENST00000556310 M0R1X1 148 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 SPDEFO95238 335 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 IGF1P05019 195 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 PF4V1P10720 104 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 CFHR3Q02985 330 aa9.07□□□□□ -0.96
SLIRP-205ENST00000556310 UBE2NLQ5JXB2 153 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms