RNA–Protein interactions for RNA: ENST00000556063.1

TDP1-214, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene TDP1, Length 1,076 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-214ENST00000556063 ADTRPQ96IZ2 230 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 AKR1E2Q96JD6 320 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 PRRT1Q99946 306 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 AGMATQ9BSE5 352 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 ZNF2Q9BSG1 426 aaPredicted RBP6.17□□□□□ -1.42
TDP1-214ENST00000556063 CCDC32Q9BV29 185 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 SLC5A7Q9GZV3 580 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 PARP12Q9H0J9 701 aaKnown RBP6.17□□□□□ -1.42
TDP1-214ENST00000556063 RAB18Q9NP72 206 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 AKIP1Q9NQ31 210 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 SCP2D1Q9UJQ7 156 aa6.17□□□□□ -1.42
TDP1-214ENST00000556063 SETD2Q9BYW2 2564 aaPredicted RBP6.16□□□□□ -1.42
TDP1-214ENST00000556063 IGHV1-3A0A0C4DH29 117 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 MDFIC2A0A1B0GVS7 189 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 ANKRD20A5PA0PJZ0 165 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 NAP1L6A6NFF2 107 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 OR5H14A6NHG9 310 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 CENPXA8MT69 81 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 H3BUX3 64 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 M0QYG6 137 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 M0R1X1 148 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 TIMM23O14925 209 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 HOXA3O43365 443 aaPredicted RBP6.16□□□□□ -1.42
TDP1-214ENST00000556063 APOA2P02652 100 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 CD1BP29016 333 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 IER3P46695 156 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 REG1BP48304 166 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 THBS3P49746 956 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 RAB13P51153 203 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 HES1Q14469 280 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 LDLRAD2Q5SZI1 272 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 LIAT1Q6ZQX7 453 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 THNSL2Q86YJ6 484 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 CMTM1Q8IZ96 169 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 MFSD4AQ8N468 514 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 DRAM1Q8N682 238 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 OR2T10Q8NGZ9 312 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 TERB2Q8NHR7 220 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 SECTM1Q8WVN6 248 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 TRIM63Q969Q1 353 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 MOB3AQ96BX8 217 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 AJUBAQ96IF1 538 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 ZNF48Q96MX3 618 aaPredicted RBP6.16□□□□□ -1.42
TDP1-214ENST00000556063 SCGB3A2Q96PL1 93 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 HSD17B10Q99714 261 aaKnown RBP6.16□□□□□ -1.42
TDP1-214ENST00000556063 C7orf50Q9BRJ6 194 aaKnown RBP6.16□□□□□ -1.42
TDP1-214ENST00000556063 TINAGL1Q9GZM7 467 aaPredicted RBP6.16□□□□□ -1.42
TDP1-214ENST00000556063 MCUBQ9NWR8 336 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 VPREB3Q9UKI3 123 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 PRELID3BQ9Y3B1 194 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 SOX21Q9Y651 276 aaPredicted RBP6.16□□□□□ -1.42
TDP1-214ENST00000556063 CELSR1Q9NYQ6 3014 aa6.16□□□□□ -1.42
TDP1-214ENST00000556063 A0A1W2PPI3 338 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 DNAJC9-AS1A6NH13 148 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 RNF212BA8MTL3 300 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 H7C2Y5 167 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 IGHV4-59P01825 116 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 CRYBA1P05813 215 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 RRASP10301 218 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 IL7P13232 177 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 PGAM2P15259 253 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 UCP3P55916 312 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 RPL15P61313 204 aaKnown RBP6.15□□□□□ -1.42
TDP1-214ENST00000556063 CATR1Q13166 79 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 LSAMPQ13449 338 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 KLF9Q13886 244 aaPredicted RBP6.15□□□□□ -1.42
TDP1-214ENST00000556063 HABP2Q14520 560 aaPredicted RBP6.15□□□□□ -1.42
TDP1-214ENST00000556063 SURF2Q15527 256 aaPredicted RBP6.15□□□□□ -1.42
TDP1-214ENST00000556063 RTL8BQ17RB0 113 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 SCGB2B2Q4G0G5 96 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 RPL39P5Q59GN2 51 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 ZNF660Q6AZW8 331 aaPredicted RBP6.15□□□□□ -1.42
TDP1-214ENST00000556063 C16orf87Q6PH81 154 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 ZNF66Q6ZN08 573 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 C16orf82Q7Z2V1 217 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 ODF3L1Q8IXM7 274 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 SLC38A6Q8IZM9 456 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 DYNAPQ8N1N2 210 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 POC5Q8NA72 575 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 OR4C16Q8NGL9 310 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 OR56B4Q8NH76 319 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 ZFAND1Q8TCF1 268 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 ZFAND2BQ8WV99 257 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 NABP2Q9BQ15 211 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 MRPL20Q9BYC9 149 aaKnown RBP6.15□□□□□ -1.42
TDP1-214ENST00000556063 CCL28Q9NRJ3 127 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 SDHAF2Q9NX18 166 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 C1RLQ9NZP8 487 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 TCF19Q9Y242 345 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 WASHC3Q9Y3C0 194 aa6.15□□□□□ -1.42
TDP1-214ENST00000556063 IGKV1D-13A0A0B4J2D9 117 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 FAM90A9PA6NNJ1 464 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 M0QZK8 103 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 GPR31O00270 319 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 MOSP00540 346 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 IGKV1D-33P01593 117 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 IGKV1-33P01594 117 aa6.14□□□□□ -1.43
TDP1-214ENST00000556063 RNASE1P07998 156 aaKnown RBP6.14□□□□□ -1.43
TDP1-214ENST00000556063 SNRNP70P08621 437 aaKnown RBP6.14□□□□□ -1.43
TDP1-214ENST00000556063 CT45A6P0DMU7 189 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms