RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 PID1Q7Z2X4 250 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 SBSPONQ8IVN8 264 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 ZNF439Q8NDP4 499 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 CCDC112Q8NEF3 446 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 OR13C9Q8NGT0 318 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 CLDND2Q8NHS1 167 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 FAM45AQ8TCE6 357 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 SLC7A6Q92536 515 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 CCDC127Q96BQ5 260 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 ABHD14BQ96IU4 210 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 REG4Q9BYZ8 158 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 GAL3ST2Q9H3Q3 398 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 TMEM216Q9P0N5 145 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 TAAR3PQ9P1P4 343 aa-0.02□□□□□ -2.41
SNX6-204ENST00000555541 GRIN2BQ13224 1484 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 CACNA1EQ15878 2313 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 LAMA4Q16363 1823 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 TRAPPC13A5PLN9 417 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 hCG_2039718K7EN88 272 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 PSMG1O95456 288 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 PRH1P02810 166 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 CRYGCP07315 174 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 OR13C7P0DN81 318 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 OR1E2P47887 323 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 EVX1P49640 407 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 CDK9P50750 372 aaKnown RBP-0.03□□□□□ -2.41
SNX6-204ENST00000555541 TAS2R45P59539 299 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 GNA12Q03113 381 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 CD164Q04900 197 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 CDK10Q15131 360 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 ARHGAP11BQ3KRB8 267 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 FAM173BQ6P4H8 233 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 ZNF705AQ6ZN79 300 aaPredicted RBP-0.03□□□□□ -2.41
SNX6-204ENST00000555541 TMEM75Q8N9X5 138 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 LGALS14Q8TCE9 139 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 RPS4Y2Q8TD47 263 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 TMA16Q96EY4 203 aaKnown RBP-0.03□□□□□ -2.41
SNX6-204ENST00000555541 SMR3AQ99954 134 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 DMAC2Q9NW81 257 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 MAST4O15021 2626 aa-0.03□□□□□ -2.41
SNX6-204ENST00000555541 SSPOA2VEC9 5147 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 TRBV6-7A0A0A0MS04 114 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 GOLGA8IPA6NC78 632 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 FABP7O15540 132 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 IGLV3-27P01718 113 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 CRYBA1P05813 215 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 IFNGR2P38484 337 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 CD79BP40259 229 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 RPL27AP46776 148 aaKnown RBP-0.04□□□□□ -2.42
SNX6-204ENST00000555541 LINC00313P59037 77 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 TSPAN5P62079 268 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 TBC1D28Q2M2D7 210 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 HNRNPA1L2Q32P51 320 aaKnown RBP-0.04□□□□□ -2.42
SNX6-204ENST00000555541 C6orf183Q5T699 404 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 LYZL1Q6UWQ5 148 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 SCGB1D4Q6XE38 83 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 MTERF4Q7Z6M4 381 aaKnown RBP-0.04□□□□□ -2.42
SNX6-204ENST00000555541 SLC22A24Q8N4F4 322 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 OR1L8Q8NGR8 309 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 OR5K1Q8NHB7 308 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 AGR3Q8TD06 166 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 SMCR5Q8TEV8 140 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 MYCBPQ99417 103 aaPredicted RBP-0.04□□□□□ -2.42
SNX6-204ENST00000555541 MED28Q9H204 178 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 METTL8Q9H825 291 aaKnown RBP-0.04□□□□□ -2.42
SNX6-204ENST00000555541 TMBIM4Q9HC24 238 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 SLC2A9Q9NRM0 540 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 LINC00527Q9UJ94 153 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 TIMM9Q9Y5J7 89 aa-0.04□□□□□ -2.42
SNX6-204ENST00000555541 EXPH5Q8NEV8 1989 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 CPAMD8Q8IZJ3 1885 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 NAV3Q8IVL0 2385 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 APCP25054 2843 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 H0YIV9 168 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 DEFA4P12838 97 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 ALDH3A1P30838 453 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 STC1P52823 247 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 EMP1P54849 157 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 TAS2R20P59543 309 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 PLPPR5Q32ZL2 321 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP-0.05□□□□□ -2.42
SNX6-204ENST00000555541 DCXRQ7Z4W1 244 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 IFT81Q8WYA0 676 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 OR5P2Q8WZ92 322 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 NKX6-2Q9C056 277 aaPredicted RBP-0.05□□□□□ -2.42
SNX6-204ENST00000555541 IFT46Q9NQC8 304 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 MACF1Q9UPN3 7388 aaKnown RBP-0.05□□□□□ -2.42
SNX6-204ENST00000555541 RP1P56715 2156 aa-0.05□□□□□ -2.42
SNX6-204ENST00000555541 FRAS1Q86XX4 4008 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 TTC41PQ6P2S7 1318 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 IGHV1-18A0A0C4DH31 117 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 A0A0D9SEW6 157 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 GSTTP1A0A1W2PQM5 241 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 TRIM64CA6NLI5 447 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 GSTZ1O43708 216 aaPredicted RBP-0.06□□□□□ -2.42
SNX6-204ENST00000555541 NPYP01303 97 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 UBBP0CG47 229 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 CALRP27797 417 aaKnown RBP-0.06□□□□□ -2.42
SNX6-204ENST00000555541 AQP5P55064 265 aa-0.06□□□□□ -2.42
SNX6-204ENST00000555541 GTF2BQ00403 316 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms