RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 NBR2O15453 112 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 NOL3O60936 208 aaKnown RBP9.6□□□□□ -0.87
SRP54-206ENST00000555317 RBBP9O75884 186 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 OPN1MWP04001 364 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 TFAP2AP05549 437 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 OPN1MW2P0DN77 364 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 OPN1MW3P0DN78 364 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 SOX6P35712 828 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 CBX5P45973 191 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 RORCP51449 518 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 PLGLAQ15195 96 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 GPR107Q5VW38 600 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 NDUFA11Q86Y39 141 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 ANKRD13BQ86YJ7 626 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 FAM110DQ8TAY7 271 aaPredicted RBP9.6□□□□□ -0.87
SRP54-206ENST00000555317 AP3S1Q92572 193 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 GON7Q9BXV9 100 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 ABCG5Q9H222 651 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 AUNIPQ9H7T9 357 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 IFT46Q9NQC8 304 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 COMMD3Q9UBI1 195 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 WASHC3Q9Y3C0 194 aa9.6□□□□□ -0.87
SRP54-206ENST00000555317 TCRBV4S1A1TA0A5B7 111 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 XRCC3O43542 346 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 GABARAPO95166 117 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 IGHG2P01859 326 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 CT45A6P0DMU7 189 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 CT45A5P0DMU8 189 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 CT45A7P0DMV0 189 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 F2RL1P55085 397 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 MZT2AQ6P582 158 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 CNIH2Q6PI25 160 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 GLDNQ6ZMI3 551 aaPredicted RBP9.59□□□□□ -0.87
SRP54-206ENST00000555317 FAM71E2Q8N5Q1 922 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 Q8N9W7 124 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 DRAXINQ8NBI3 349 aaPredicted RBP9.59□□□□□ -0.87
SRP54-206ENST00000555317 OR4F17Q8NGA8 305 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 ACOT12Q8WYK0 555 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 OR4F4Q96R69 305 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 CITED2Q99967 270 aaPredicted RBP9.59□□□□□ -0.87
SRP54-206ENST00000555317 TOLLIPQ9H0E2 274 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 ZNF107Q9UII5 783 aaPredicted RBP9.59□□□□□ -0.87
SRP54-206ENST00000555317 ANXA10Q9UJ72 324 aa9.59□□□□□ -0.87
SRP54-206ENST00000555317 NOTCH3Q9UM47 2321 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 IGKV1D-8A0A087WSZ0 117 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 A0A1W2PRX2 142 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 H0YJW9 148 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 SSX5O60225 188 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 TSPAN15O95858 294 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 PF4V1P10720 104 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 LUMP51884 338 aaPredicted RBP9.58□□□□□ -0.88
SRP54-206ENST00000555317 RTL8BQ17RB0 113 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 HIST2H2BDQ6DRA6 164 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 H1FOOQ8IZA3 346 aaPredicted RBP9.58□□□□□ -0.88
SRP54-206ENST00000555317 BEST4Q8NFU0 473 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 NOL4LQ96MY1 436 aaPredicted RBP9.58□□□□□ -0.88
SRP54-206ENST00000555317 NAA50Q9GZZ1 169 aaKnown RBP9.58□□□□□ -0.88
SRP54-206ENST00000555317 PLSCR3Q9NRY6 295 aa9.58□□□□□ -0.88
SRP54-206ENST00000555317 TSSC4Q9Y5U2 329 aaPredicted RBP9.58□□□□□ -0.88
SRP54-206ENST00000555317 J3QRK9 145 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 SLC22A5O76082 557 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 APOA1P02647 267 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 VDAC1P21796 283 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 NFYAP23511 347 aaPredicted RBP9.57□□□□□ -0.88
SRP54-206ENST00000555317 TAS2R20P59543 309 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 RPS16P62249 146 aaKnown RBP9.57□□□□□ -0.88
SRP54-206ENST00000555317 TAGLNQ01995 201 aaKnown RBP9.57□□□□□ -0.88
SRP54-206ENST00000555317 CTF1Q16619 201 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 C5orf64Q2M2E5 130 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 ZNF329Q86UD4 541 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 HOGA1Q86XE5 327 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 PDPNQ86YL7 162 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 CLVS1Q8IUQ0 354 aaPredicted RBP9.57□□□□□ -0.88
SRP54-206ENST00000555317 STPG2Q8N412 459 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 COMMD1Q8N668 190 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 OR5AN1Q8NGI8 311 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 WIPF2Q8TF74 440 aaPredicted RBP9.57□□□□□ -0.88
SRP54-206ENST00000555317 ABHD5Q8WTS1 349 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 R3HDM4Q96D70 268 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 ADTRPQ96IZ2 230 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 CMTM3Q96MX0 182 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 TSNAXQ99598 290 aaKnown RBP9.57□□□□□ -0.88
SRP54-206ENST00000555317 RNF5Q99942 180 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 SLC35D1Q9NTN3 355 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 NECAP2Q9NVZ3 263 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 SDHAF2Q9NX18 166 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 LINC00527Q9UJ94 153 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 OR2W1Q9Y3N9 320 aa9.57□□□□□ -0.88
SRP54-206ENST00000555317 CMYA5Q8N3K9 4069 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 MEIS3P1A6NDR6 274 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 FAM25AB3EWG3 89 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 FAM25CB3EWG5 89 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 FAM25GB3EWG6 89 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 HLA-DRB1P01911 266 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 OR5H8P0DN80 308 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 RRASP10301 218 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 CNTFRP26992 372 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 PRSS3P35030 304 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 ALDH3B2P48448 385 aa9.56□□□□□ -0.88
SRP54-206ENST00000555317 THBS3P49746 956 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms