RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 ACTL6BO94805 426 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 NDUFA3O95167 84 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CDRT1O95170 752 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 LY6G6CO95867 125 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MOSP00540 346 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CST1P01037 141 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 AMBPP02760 352 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MT-ND2P03891 347 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MT-ND4P03905 459 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 LGALS1P09382 135 aaKnown RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OR8U8P0C7N1 319 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 RCC1P18754 421 aaPredicted RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CD1BP29016 333 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 SOX6P35712 828 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MNDAP41218 407 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OR3A3P47888 321 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 INSL3P51460 131 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 ALDH3A2P51648 485 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 GTF2A1P52655 376 aaPredicted RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 ATP1B3P54709 279 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 PRRX1P54821 245 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 ACTBP60709 375 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CDC42P60953 191 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CX3CL1P78423 397 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 PAX5Q02548 391 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MADCAM1Q13477 382 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 DCTN2Q13561 401 aaKnown RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 KLF5Q13887 457 aaPredicted RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 ECSCRQ19T08 205 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 C5orf64Q2M2E5 130 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 SPIN3Q5JUX0 258 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 LCN1P1Q5VSP4 162 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 NXNL2Q5VZ03 156 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 ELP2Q6IA86 826 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 C19orf35Q6ZS72 473 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 SLC25A48Q6ZT89 311 aaKnown RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 UTS2BQ765I0 119 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 PIGWQ7Z7B1 504 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 LYPD6Q86Y78 171 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 KRTAP7-1Q8IUC3 87 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 GAPTQ8N292 157 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 DNAAF1Q8NEP3 725 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 NPBQ8NG41 125 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OR4D6Q8NGJ1 314 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OR13C5Q8NGS8 318 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OR2T10Q8NGZ9 312 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OR4K15Q8NH41 348 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 GATAD1Q8WUU5 269 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 ASB17Q8WXJ9 295 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 ARL11Q969Q4 196 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MCUR1Q96AQ8 359 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 PELI1Q96FA3 418 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OPALINQ96PE5 141 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CNN2Q99439 309 aaKnown RBP2.33□□□□□ -2.04
SLIRP-202ENST00000553981 PDCD1LG2Q9BQ51 273 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OR51J1Q9H342 316 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 GAL3ST2Q9H3Q3 398 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 FBXL15Q9H469 300 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 NCOR1P1Q9H4R4 102 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 PARP11Q9NR21 331 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 CLN6Q9NWW5 311 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 VSIG4Q9Y279 399 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 FAT1Q14517 4588 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 OBSCNQ5VST9 7968 aa2.33□□□□□ -2.04
SLIRP-202ENST00000553981 MUC4Q99102 2169 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 A0A0J9YWU9 116 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 TCRBV3S1A0A5B6 114 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF670-ZNF695F2Z2N8 137 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 SDCBPO00560 298 aaPredicted RBP2.32□□□□□ -2.04
SLIRP-202ENST00000553981 MPZL2O60487 215 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 FKBP6O75344 327 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 RGS11O94810 467 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 S1PR2O95136 353 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CYB5AP00167 134 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 LALBAP00709 142 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 IGLV2-23P01705 113 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 HLA-DRB1P01911 266 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 HBZP02008 142 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 GAPDHP04406 335 aaKnown RBP2.32□□□□□ -2.04
SLIRP-202ENST00000553981 HSPB1P04792 205 aaKnown RBP2.32□□□□□ -2.04
SLIRP-202ENST00000553981 HMGN1P05114 100 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ISG15P05161 165 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CRYGBP07316 175 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CT45A6P0DMU7 189 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CT45A5P0DMU8 189 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CT45A7P0DMV0 189 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 GABRB1P18505 474 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 VDAC1P21796 283 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 CEACAM3P40198 252 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 SYNJ2BPP57105 145 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF45Q02386 682 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 PJVKQ0ZLH3 352 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 IL13RA2Q14627 380 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 MMDQ15546 238 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 KISS1Q15726 138 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 MORN2Q502X0 79 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 PAN3Q58A45 887 aaKnown RBP2.32□□□□□ -2.04
SLIRP-202ENST00000553981 RPL39P5Q59GN2 51 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 C6orf141Q5SZD1 244 aa2.32□□□□□ -2.04
SLIRP-202ENST00000553981 FAM27D1Q5T7N8 215 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms