RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 TENM3Q9P273 2699 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 A0A0A6YYD4 124 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 H0YJW9 148 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 OVOL1O14753 267 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 SOCS1O15524 211 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 GNB1P62873 340 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 CX3CL1P78423 397 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 MLLT11Q13015 90 aaPredicted RBP9.91□□□□□ -0.82
LINC00643-202ENST00000553426 KIAA0141Q14154 515 aaPredicted RBP9.91□□□□□ -0.82
LINC00643-202ENST00000553426 IRF3Q14653 427 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 ACTBL2Q562R1 376 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 GLDNQ6ZMI3 551 aaPredicted RBP9.91□□□□□ -0.82
LINC00643-202ENST00000553426 OR5AN1Q8NGI8 311 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 AGMATQ9BSE5 352 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 VCX3BQ9H321 246 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 METTL1Q9UBP6 276 aaKnown RBP9.91□□□□□ -0.82
LINC00643-202ENST00000553426 LSM4Q9Y4Z0 139 aaKnown RBP9.91□□□□□ -0.82
LINC00643-202ENST00000553426 U3KQK5 164 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 DYNC2H1Q8NCM8 4307 aaKnown RBP9.91□□□□□ -0.82
LINC00643-202ENST00000553426 SACSQ9NZJ4 4579 aa9.91□□□□□ -0.82
LINC00643-202ENST00000553426 LINC01619G3V211 115 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 SAP30O75446 220 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 APOA2P02652 100 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 CALRP27797 417 aaKnown RBP9.9□□□□□ -0.82
LINC00643-202ENST00000553426 SERPINB10P48595 397 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 CRIP2P52943 208 aaPredicted RBP9.9□□□□□ -0.82
LINC00643-202ENST00000553426 AQP4P55087 323 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 RPS16P62249 146 aaKnown RBP9.9□□□□□ -0.82
LINC00643-202ENST00000553426 RPS25P62851 125 aaKnown RBP9.9□□□□□ -0.82
LINC00643-202ENST00000553426 AKIRIN2Q53H80 203 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 UNQ5815/PRO19632Q6UWF5 114 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 TMEM91Q6ZNR0 172 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 PPP1R27Q86WC6 154 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 PTX4Q96A99 478 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 FAM3DQ96BQ1 224 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 ARHGAP5-AS1Q96IT6 56 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 HDHD3Q9BSH5 251 aaPredicted RBP9.9□□□□□ -0.82
LINC00643-202ENST00000553426 PECRQ9BY49 303 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 DUSP21Q9H596 190 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 SLA2Q9H6Q3 261 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 Q9N2K0 584 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 ACOT13Q9NPJ3 140 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 OR1A1Q9P1Q5 309 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 SMAD5-AS1Q9Y6J3 95 aa9.9□□□□□ -0.82
LINC00643-202ENST00000553426 TRDCB7Z8K6 153 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 ANKRD65E5RJM6 399 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 ARPC1BO15143 372 aaKnown RBP9.89□□□□□ -0.83
LINC00643-202ENST00000553426 DENRO43583 198 aaKnown RBP9.89□□□□□ -0.83
LINC00643-202ENST00000553426 SPDEFO95238 335 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 TFAP2AP05549 437 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 LGALS1P09382 135 aaKnown RBP9.89□□□□□ -0.83
LINC00643-202ENST00000553426 SCTP09683 121 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 CD3GP09693 182 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 NDPQ00604 133 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 CBX3Q13185 183 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 C2orf76Q3KRA6 126 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 CD200R1LQ6Q8B3 271 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 ZNF562Q6V9R5 426 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 PRSS48Q7RTY5 328 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 PDPNQ86YL7 162 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 DCUN1D4Q92564 292 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 FLYWCH2Q96CP2 140 aaKnown RBP9.89□□□□□ -0.83
LINC00643-202ENST00000553426 CLCC1Q96S66 551 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 MGLLQ99685 303 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 TOLLIPQ9H0E2 274 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 PARP12Q9H0J9 701 aaKnown RBP9.89□□□□□ -0.83
LINC00643-202ENST00000553426 NKX1-2Q9UD57 310 aaPredicted RBP9.89□□□□□ -0.83
LINC00643-202ENST00000553426 RAB22AQ9UL26 194 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 BLOC1S6Q9UL45 172 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 NUBP2Q9Y5Y2 271 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 V9GY05 133 aa9.89□□□□□ -0.83
LINC00643-202ENST00000553426 FCN1O00602 326 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 PDCD5O14737 125 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 CNIH1O95406 144 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 GADD45AP24522 165 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 TMEM50BP56557 158 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 CLDN12P56749 244 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 PSG5Q15238 335 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 ASPHD1Q5U4P2 390 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 DRAXINQ8NBI3 349 aaPredicted RBP9.88□□□□□ -0.83
LINC00643-202ENST00000553426 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.88□□□□□ -0.83
LINC00643-202ENST00000553426 LFNGQ8NES3 379 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 OR4A4PQ8NGN8 299 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 OR6Q1Q8NGQ2 317 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 ARPC1AQ92747 370 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 RAB3CQ96E17 227 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 GFI1Q99684 422 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 CENPOQ9BU64 300 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 ALX4Q9H161 411 aaPredicted RBP9.88□□□□□ -0.83
LINC00643-202ENST00000553426 ZNF355PQ9NSJ1 428 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 RDH8Q9NYR8 311 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 FBXO7Q9Y3I1 522 aa9.88□□□□□ -0.83
LINC00643-202ENST00000553426 FOXI3A8MTJ6 420 aaPredicted RBP9.87□□□□□ -0.83
LINC00643-202ENST00000553426 FABP7O15540 132 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 SOX15O60248 233 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 CA2P00918 260 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 HSPB1P04792 205 aaKnown RBP9.87□□□□□ -0.83
LINC00643-202ENST00000553426 OR8U9P0C7N5 309 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 CRHBPP24387 322 aa9.87□□□□□ -0.83
LINC00643-202ENST00000553426 HSPA13P48723 471 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms