RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 F2RP25116 425 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 HTR1DP28221 377 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 THBS3P49746 956 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 LGALS4P56470 323 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 BPIFB3P59826 476 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 PPP1R1AQ13522 171 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 MIDNQ504T8 468 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 ZNF833PQ6ZTB9 187 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 TBC1D26Q86UD7 250 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 PNKDQ8N490 385 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 WFDC11Q8NEX6 87 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 MITD1Q8WV92 249 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 TMEM230Q96A57 120 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 PCGF1Q9BSM1 259 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 OR51J1Q9H342 316 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 C7orf69Q9H7B7 122 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 SIRT7Q9NRC8 400 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 TBL2Q9Y4P3 447 aaKnown RBP8.48□□□□□ -1.05
NEK3-203ENST00000551355 ALG5Q9Y673 324 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 CENPEQ02224 2701 aa8.48□□□□□ -1.05
NEK3-203ENST00000551355 ODF3BA8MYP8 253 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 M0R1X1 148 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 RBFOX2O43251 390 aaKnown RBP eCLIP8.47□□□□□ -1.05
NEK3-203ENST00000551355 SSNA1O43805 119 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 TGFAP01135 160 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 IGHV3-7P01780 117 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 GAPDHP04406 335 aaKnown RBP8.47□□□□□ -1.05
NEK3-203ENST00000551355 ARG1P05089 322 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 SERPINE2P07093 398 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 TRAPPC2P0DI81 140 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 TRAPPC2BP0DI82 140 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 RRASP10301 218 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 HOXB4P17483 251 aaPredicted RBP8.47□□□□□ -1.05
NEK3-203ENST00000551355 COX7A1P24310 79 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 DUTP33316 252 aaKnown RBP8.47□□□□□ -1.05
NEK3-203ENST00000551355 ARHGDIBP52566 201 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 CBX3Q13185 183 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 EIF4EBP1Q13541 118 aaPredicted RBP8.47□□□□□ -1.05
NEK3-203ENST00000551355 FAM53AQ6NSI3 398 aaPredicted RBP8.47□□□□□ -1.05
NEK3-203ENST00000551355 CCDC144NLQ6NUI1 221 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 ODF3L1Q8IXM7 274 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 LGI3Q8N145 548 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 C12orf45Q8N5I9 185 aaPredicted RBP8.47□□□□□ -1.05
NEK3-203ENST00000551355 CAPSLQ8WWF8 208 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 IL22RA2Q969J5 263 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 ST6GALNAC6Q969X2 333 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 MSI2Q96DH6 328 aaKnown RBP8.47□□□□□ -1.05
NEK3-203ENST00000551355 TBX15Q96SF7 602 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 AIFM2Q9BRQ8 373 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 BEX2Q9BXY8 128 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 TMEM222Q9H0R3 208 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 MED28Q9H204 178 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 BEX1Q9HBH7 125 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 DPM3Q9P2X0 92 aa8.47□□□□□ -1.05
NEK3-203ENST00000551355 ABCA12Q86UK0 2595 aa8.46□□□□□ -1.05
NEK3-203ENST00000551355 A0A0B4J293 547 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 A0A1W2PPE3 182 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 DUXBA0A1W2PPF3 345 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 RNASEK-C17orf49H0YIS7 233 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 TNFSF12O43508 249 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 OR5AC1P0C628 307 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 UCP1P25874 307 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 MC5RP33032 325 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 RAB13P51153 203 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 SUPT4H1P63272 117 aaKnown RBP8.46□□□□□ -1.06
NEK3-203ENST00000551355 ZNF816Q0VGE8 651 aaPredicted RBP8.46□□□□□ -1.06
NEK3-203ENST00000551355 GPR157Q5UAW9 335 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 DHRS7BQ6IAN0 325 aaPredicted RBP8.46□□□□□ -1.06
NEK3-203ENST00000551355 HCP5Q6MZN7 132 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 LIN54Q6MZP7 749 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 LIAT1Q6ZQX7 453 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 TGIF2LXQ8IUE1 241 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 OR8H3Q8N146 312 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 LRTM2Q8N967 370 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 OR4P4Q8NGL7 312 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 TCTEX1D2Q8WW35 142 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 ASB13Q8WXK3 278 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 LHX4Q969G2 390 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 RPEQ96AT9 228 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 MALSU1Q96EH3 234 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 TMEM56Q96MV1 263 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 ZNF251Q9BRH9 671 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 SEC22CQ9BRL7 303 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 TMEM56-RWDD3S4R434 201 aa8.46□□□□□ -1.06
NEK3-203ENST00000551355 HMX3A6NHT5 357 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 LY6LH3BQJ8 138 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 CDS2O95674 445 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 IFNA21P01568 189 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 APOA2P02652 100 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 RRAS2P62070 204 aaPredicted RBP8.45□□□□□ -1.06
NEK3-203ENST00000551355 TMEM187Q14656 261 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 SLC9A3R2Q15599 337 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 RTL8BQ17RB0 113 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 RPL39P5Q59GN2 51 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 UTF1Q5T230 341 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 TPTE2P1Q5T6R2 138 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 ZNF695Q8IW36 515 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 OR51H1Q8NH63 302 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 OR4S2Q8NH73 311 aa8.45□□□□□ -1.06
NEK3-203ENST00000551355 CASTOR1Q8WTX7 329 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms