RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 BAXQ07812 192 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 EFNB3Q15768 340 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 UNQ6494/PRO21346Q6UXR6 183 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 Q6ZRG5 221 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 LINC01560Q8TB33 94 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 RAB40CQ96S21 281 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 SAP30LQ9HAJ7 183 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 RAB9BQ9NP90 201 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 MMP26Q9NRE1 261 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 LOC400499M0QZD8 3231 aa9.52□□□□□ -0.89
RAB5C-208ENST00000551338 TRGV10A0A0A0MS01 117 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 KBTBD11-OT1A0A1B0GTJ5 212 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 LRRC30A6NM36 301 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 VSTM5A8MXK1 200 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 NUDT19A8MXV4 375 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 FAM90A26D6RGX4 464 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM178BH3BS89 294 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 TOR1AO14656 332 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 TNFRSF13BO14836 293 aaPredicted RBP9.51□□□□□ -0.89
RAB5C-208ENST00000551338 RAB29O14966 203 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 CST7O76096 145 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 IAPPP10997 89 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF134P52741 427 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 BLOC1S1P78537 153 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM267Q0VDI3 215 aaPredicted RBP9.51□□□□□ -0.89
RAB5C-208ENST00000551338 PJVKQ0ZLH3 352 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 CLINT1Q14677 625 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 NCR3LG1Q68D85 454 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 UQCC3Q6UW78 93 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 BTNL8Q6UX41 500 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 IL34Q6ZMJ4 242 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 STPG2Q8N412 459 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 HSD17B11Q8NBQ5 300 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF439Q8NDP4 499 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 BPIFCQ8NFQ6 507 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 OR5C1Q8NGR4 320 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 CORO2AQ92828 525 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 EGLN1Q9GZT9 426 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 SH3BGRL3Q9H299 93 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 NARFLQ9H6Q4 476 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 DYNLRB1Q9NP97 96 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 KCNJ16Q9NPI9 418 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 IDI2-AS1Q9NZ38 188 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 CLN8Q9UBY8 286 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 NUP50Q9UKX7 468 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 GAB2Q9UQC2 676 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 DOCK11Q5JSL3 2073 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 POLEQ07864 2286 aa9.51□□□□□ -0.89
RAB5C-208ENST00000551338 PPIAL4EA0A075B759 164 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 TRAV38-1A0A0B4J264 116 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 PPIAL4DF5H284 164 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 H3BP45 60 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 M0R1X1 148 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 DLL1O00548 723 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 MMP23AO75900 390 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 CLDN14O95500 239 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 IGHV3-7P01780 117 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 PPIAL4FP0DN26 164 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 ATP6V0CP27449 155 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 APOBEC3AP31941 199 aaPredicted RBP9.5□□□□□ -0.89
RAB5C-208ENST00000551338 ID4P47928 161 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF266Q14584 549 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 TUSC1Q2TAM9 212 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 RPL39P5Q59GN2 51 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 C1orf229Q6ZS94 237 aaPredicted RBP9.5□□□□□ -0.89
RAB5C-208ENST00000551338 HAPLN4Q86UW8 402 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 C1orf87Q8N0U7 546 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 ABHD14AQ9BUJ0 271 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 RBKSQ9H477 322 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 LINC00574Q9H8X3 128 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 PARP11Q9NR21 331 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM106BQ9NUM4 274 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 PSENENQ9NZ42 101 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 COQ3Q9NZJ6 369 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 HSPB7Q9UBY9 170 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 CACFD1Q9UGQ2 172 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 LAMP3Q9UQV4 416 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 PPIAL4AQ9Y536 164 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 RFNGQ9Y644 331 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 WSB1Q9Y6I7 421 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 FRYQ5TBA9 3013 aa9.5□□□□□ -0.89
RAB5C-208ENST00000551338 A0A1W2PPE3 182 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 B9A039 149 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 ATG12O94817 140 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 CRYZL1O95825 349 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 KRASP01116 189 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 DANCRP0C864 163 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 SULT1A1P50225 295 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 RAB7AP51149 207 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 TAS2R30P59541 319 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 SRSF3P84103 164 aaKnown RBP9.49□□□□□ -0.89
RAB5C-208ENST00000551338 ARL16Q0P5N6 197 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 LY6DQ14210 128 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 ZNF273Q14593 569 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM30BQ3MIR4 351 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 CT45A1Q5HYN5 189 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 LYPD2Q6UXB3 125 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 TMEM217Q8N7C4 229 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 CT45A3Q8NHU0 189 aa9.49□□□□□ -0.89
RAB5C-208ENST00000551338 LYPD6BQ8NI32 183 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms