RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 IGLV1-40P01703 118 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 FCGR3AP08637 254 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 GALP22466 123 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 SLC6A1P30531 599 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 CEACAM6P40199 344 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 CDX1P47902 265 aaPredicted RBP10.15□□□□□ -0.78
NPAS3-209ENST00000551008 CRIP2P52943 208 aaPredicted RBP10.15□□□□□ -0.78
NPAS3-209ENST00000551008 FHL3Q13643 280 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 IGSF11Q5DX21 431 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 CXorf66Q5JRM2 361 aaPredicted RBP10.15□□□□□ -0.78
NPAS3-209ENST00000551008 ZNF383Q8NA42 475 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 DRAXINQ8NBI3 349 aaPredicted RBP10.15□□□□□ -0.78
NPAS3-209ENST00000551008 MAFIPQ8WZ33 124 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 RAB3CQ96E17 227 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 FBXL15Q9H469 300 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 GNB4Q9HAV0 340 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 RNF150Q9ULK6 438 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 GAB2Q9UQC2 676 aa10.15□□□□□ -0.78
NPAS3-209ENST00000551008 OR5H14A6NHG9 310 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 TRDCB7Z8K6 153 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 RRHO14718 337 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 RRP9O43818 475 aaKnown RBP10.14□□□□□ -0.79
NPAS3-209ENST00000551008 IGKV1-16P04430 117 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 HIST1H1DP16402 221 aaKnown RBP10.14□□□□□ -0.79
NPAS3-209ENST00000551008 GNB3P16520 340 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 RAB3BP20337 219 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 RAB6AP20340 208 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 ZBTB25P24278 435 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 FGF9P31371 208 aaPredicted RBP10.14□□□□□ -0.79
NPAS3-209ENST00000551008 SSBP2P81877 361 aaPredicted RBP10.14□□□□□ -0.79
NPAS3-209ENST00000551008 KIR2DS1Q14954 304 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 MINDY2Q8NBR6 621 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 OR10R2Q8NGX6 335 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 PARP11Q9NR21 331 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 TPSG1Q9NRR2 321 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 TXNL4BQ9NX01 149 aaKnown RBP10.14□□□□□ -0.79
NPAS3-209ENST00000551008 RDH8Q9NYR8 311 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 ZNF230Q9UIE0 474 aaPredicted RBP10.14□□□□□ -0.79
NPAS3-209ENST00000551008 MGAT4AQ9UM21 535 aa10.14□□□□□ -0.79
NPAS3-209ENST00000551008 SORL1Q92673 2214 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 I3L521 148 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 FABP7O15540 132 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 DUS4LO95620 317 aaKnown RBP10.13□□□□□ -0.79
NPAS3-209ENST00000551008 GSTT2P0CG29 244 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 GSTT2BP0CG30 244 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 VDAC1P21796 283 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 MYL9P24844 172 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 PSMB9P28065 219 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 PSMD7P51665 324 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 CX3CL1P78423 397 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 LIN54Q6MZP7 749 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 ZNF491Q8N8L2 437 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 OR4A4PQ8NGN8 299 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 C4orf3Q8WVX3 66 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 EDARADDQ8WWZ3 215 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 GON7Q9BXV9 100 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 RNF167Q9H6Y7 350 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 WASHC3Q9Y3C0 194 aa10.13□□□□□ -0.79
NPAS3-209ENST00000551008 TRBV6-7A0A0A0MS04 114 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 TRAV41A0A0B4J266 112 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 PDCD5O14737 125 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 HSPA12AO43301 675 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 IGLV2-23P01705 113 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 LUMP51884 338 aaPredicted RBP10.12□□□□□ -0.79
NPAS3-209ENST00000551008 GNB1P62873 340 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 CASTOR1Q8WTX7 329 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 OR51E2Q9H255 320 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.12□□□□□ -0.79
NPAS3-209ENST00000551008 NUBP2Q9Y5Y2 271 aa10.12□□□□□ -0.79
NPAS3-209ENST00000551008 A0A075B6Q4 140 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 CLEC2LP0C7M8 214 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 OR5H8P0DN80 308 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 RUNX1Q01196 453 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 PSG5Q15238 335 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 MRGPRG-AS1Q2M3A8 158 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 ZNF773Q6PK81 442 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 Q6ZS49 121 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 OR8U1Q8NH10 309 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 CHCHD6Q9BRQ6 235 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 FAM103A1Q9BTL3 118 aaKnown RBP10.11□□□□□ -0.79
NPAS3-209ENST00000551008 YTHDF1Q9BYJ9 559 aaKnown RBP10.11□□□□□ -0.79
NPAS3-209ENST00000551008 GHITMQ9H3K2 345 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 SDHAF2Q9NX18 166 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 STUB1Q9UNE7 303 aa10.11□□□□□ -0.79
NPAS3-209ENST00000551008 NOTOA8MTQ0 251 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 H7C2Y5 167 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 M0R1X1 148 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 ARPC1BO15143 372 aaKnown RBP10.1□□□□□ -0.79
NPAS3-209ENST00000551008 BET1O15155 118 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 SSX5O60225 188 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 RBBP9O75884 186 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 DIRAS3O95661 229 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 TFAP2AP05549 437 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 CRYGBP07316 175 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 OR8U9P0C7N5 309 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 MC5RP33032 325 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 ECSCRQ19T08 205 aa10.1□□□□□ -0.79
NPAS3-209ENST00000551008 ZNF660Q6AZW8 331 aaPredicted RBP10.1□□□□□ -0.79
NPAS3-209ENST00000551008 H1FOOQ8IZA3 346 aaPredicted RBP10.1□□□□□ -0.79
NPAS3-209ENST00000551008 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms