RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 PIPOXQ9P0Z9 390 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 WASHC3Q9Y3C0 194 aa8.81□□□□□ -1
SMARCD1-208ENST00000550280 IGKV1-6A0A0C4DH72 117 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 DYNC1I1O14576 645 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 IGLV2-23P01705 113 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 TRGV3P03979 118 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 TFAP2AP05549 437 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 ARSBP15848 533 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 MYL12AP19105 171 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 TMEM267Q0VDI3 215 aaPredicted RBP8.8□□□□□ -1
SMARCD1-208ENST00000550280 PJVKQ0ZLH3 352 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 PLGLAQ15195 96 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 C1orf100Q5SVJ3 147 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 LINC00322Q6ZN03 302 aaPredicted RBP8.8□□□□□ -1
SMARCD1-208ENST00000550280 TMEM80Q96HE8 168 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 SPATA25Q9BR10 227 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 TM2D1Q9BX74 207 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 C11orf54Q9H0W9 315 aaPredicted RBP8.8□□□□□ -1
SMARCD1-208ENST00000550280 SLA2Q9H6Q3 261 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 SMPD3Q9NY59 655 aaPredicted RBP8.8□□□□□ -1
SMARCD1-208ENST00000550280 ERGIC3Q9Y282 383 aa8.8□□□□□ -1
SMARCD1-208ENST00000550280 FRAS1Q86XX4 4008 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 ANKRD34BA5PLL1 514 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 FOXI3A8MTJ6 420 aaPredicted RBP8.79□□□□□ -1
SMARCD1-208ENST00000550280 TMEM14DPA8MWL7 114 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 H7C2Y5 167 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 ITGB1BP1O14713 200 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 RBBP9O75884 186 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 CD1AP06126 327 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 CRYGBP07316 175 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 CSN3P07498 182 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 GSTP1P09211 210 aaKnown RBP8.79□□□□□ -1
SMARCD1-208ENST00000550280 CD37P11049 281 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 CELP19835 753 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 MC5RP33032 325 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 MECP2P51608 486 aaKnown RBP8.79□□□□□ -1
SMARCD1-208ENST00000550280 SYNJ2BPP57105 145 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 ST3GAL4Q11206 333 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 ANKRD13BQ86YJ7 626 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 SGPP2Q8IWX5 399 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 NKAIN3Q8N8D7 197 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 POC5Q8NA72 575 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 OR5T1Q8NG75 326 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 OR9G4Q8NGQ1 327 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 GRPEL2Q8TAA5 225 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 C5orf30Q96GV9 206 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 NEDD4LQ96PU5 975 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 RNF5Q99942 180 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 STEAP1Q9UHE8 339 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 RNF150Q9ULK6 438 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 LRRC42Q9Y546 428 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 HERC2O95714 4834 aa8.79□□□□□ -1
SMARCD1-208ENST00000550280 TRBV6-6A0A0A6YYG2 114 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 SOCS1O15524 211 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 SLC25A17O43808 307 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 SCTP09683 121 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 DYRK1AQ13627 763 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 FXYD3Q14802 87 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 PTX4Q96A99 478 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 GFI1Q99684 422 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 FAM110AQ9BQ89 295 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 ELOVL1Q9BW60 279 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 TMEM59Q9BXS4 323 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 KRTAP17-1Q9BYP8 105 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 LPAR5Q9H1C0 372 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 HIPK2Q9H2X6 1198 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 RANGRFQ9HD47 186 aaPredicted RBP8.78□□□□□ -1
SMARCD1-208ENST00000550280 ABRACLQ9P1F3 81 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 GHRLQ9UBU3 117 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 AK3Q9UIJ7 227 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 TNCP24821 2201 aa8.78□□□□□ -1
SMARCD1-208ENST00000550280 IRGMA1A4Y4 181 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 EFCAB10A6NFE3 127 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 SLC22A1O15245 554 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 SPDEFO95238 335 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 GNAO1P09471 354 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 ZP3P21754 424 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 CEACAM6P40199 344 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 TMEM50BP56557 158 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 TAS2R43P59537 309 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 HLA-DRB3P79483 266 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 ZNF343Q6P1L6 599 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 ZNF555Q8NEP9 628 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 SETD6Q8TBK2 473 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 Q9N2K0 584 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 PSORS1C1Q9UIG5 152 aa8.77□□□□□ -1.01
SMARCD1-208ENST00000550280 SRRM4A7MD48 611 aaKnown RBP8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 H3BUA1 57 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 BRI3O95415 125 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 UBBP0CG47 229 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 CPEP16870 476 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 EDN2P20800 178 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 WNT4P56705 351 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 RPS16P62249 146 aaKnown RBP8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 ACSM3Q53FZ2 586 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 MOB1BQ7L9L4 216 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 PDPNQ86YL7 162 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 FAM89BQ8N5H3 189 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 NANOGP1Q8N7R0 232 aa8.76□□□□□ -1.01
SMARCD1-208ENST00000550280 FBLIM1Q8WUP2 373 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms