RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 H3BNX3 289 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 SLC22A1O15245 554 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 PROP1O75360 226 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 WBP4O75554 376 aaKnown RBP7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 CRTAPO75718 401 aaPredicted RBP7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 BAG2O95816 211 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 LALBAP00709 142 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 CAPGP40121 348 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 PSG5Q15238 335 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 TATDN3Q17R31 274 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 RPL39P5Q59GN2 51 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 AWAT2Q6E213 333 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 ZNF880Q6PDB4 577 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 GTSCR1Q86UQ5 136 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 SVOPQ8N4V2 548 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 ZNF485Q8NCK3 441 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 ABHD5Q8WTS1 349 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 CYYR1Q96J86 154 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 PGLYRP3Q96LB9 341 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 SLC29A1Q99808 456 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 FAM103A1Q9BTL3 118 aaKnown RBP7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 FAAP24Q9BTP7 215 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 HIPK2Q9H2X6 1198 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 TUBA4BQ9H853 241 aa7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 METTL1Q9UBP6 276 aaKnown RBP7.5□□□□□ -1.21
TRAFD1-207ENST00000550051 C13orf42A0A1B0GVH6 325 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 IRGMA1A4Y4 181 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 H7C2Y5 167 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 CIB2O75838 187 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 SPDEFO95238 335 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 NAPSAO96009 420 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 CSN3P07498 182 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 FXYD3Q14802 87 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 SMN1Q16637 294 aaKnown RBP7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 ZNF343Q6P1L6 599 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 ZFP1Q6P2D0 407 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 GLDNQ6ZMI3 551 aaPredicted RBP7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 Q8N402 240 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 POC5Q8NA72 575 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 TMEM68Q96MH6 324 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 NEDD4LQ96PU5 975 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 CLCC1Q96S66 551 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 TSNAXQ99598 290 aaKnown RBP7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 SULT4A1Q9BR01 284 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 C9orf16Q9BUW7 83 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 TMED9Q9BVK6 235 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 CLEC2DQ9UHP7 191 aa7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 DIMT1Q9UNQ2 313 aaKnown RBP7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 EXOSC1Q9Y3B2 195 aaKnown RBP7.49□□□□□ -1.21
TRAFD1-207ENST00000550051 HYDINQ4G0P3 5121 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 TRBV6-6A0A0A6YYG2 114 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 A0A1W2PPK0 400 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 ANKRD34BA5PLL1 514 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 CA2P00918 260 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 CD1AP06126 327 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 UBBP0CG47 229 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 MYL12AP19105 171 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 AADACP22760 399 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 SYNJ2BPP57105 145 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 LCN12Q6JVE5 192 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 NKAIN3Q8N8D7 197 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 OR5T1Q8NG75 326 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 OR2K2Q8NGT1 345 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 IL1F10Q8WWZ1 152 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 FAM46BQ96A09 425 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 PTX4Q96A99 478 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 ABHD14BQ96IU4 210 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 DERL3Q96Q80 235 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 KRTAP17-1Q9BYP8 105 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 C11orf54Q9H0W9 315 aaPredicted RBP7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 RIMS4Q9H426 269 aaPredicted RBP7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 ZNF355PQ9NSJ1 428 aa7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 PEF1Q9UBV8 284 aaKnown RBP7.48□□□□□ -1.21
TRAFD1-207ENST00000550051 SHISA3A0PJX4 238 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 IZUMO1RA6ND01 250 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 IGKV1-16P04430 117 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 CRYGBP07316 175 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 CD37P11049 281 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 CPEP16870 476 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 ZBTB25P24278 435 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 HTR2CP28335 458 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 RPS16P62249 146 aaKnown RBP7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 SSBP2P81877 361 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 MED21Q13503 144 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 C6orf201Q7Z4U5 140 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 LAX1Q8IWV1 398 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 C10orf67Q8IYJ2 551 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 THRSPQ92748 146 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 TMEM80Q96HE8 168 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 TM2D1Q9BX74 207 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 TINAGL1Q9GZM7 467 aaPredicted RBP7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 PARP12Q9H0J9 701 aaKnown RBP7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 CEPT1Q9Y6K0 416 aa7.47□□□□□ -1.21
TRAFD1-207ENST00000550051 ZNF785A8K8V0 405 aa7.46□□□□□ -1.22
TRAFD1-207ENST00000550051 AIREO43918 545 aa7.46□□□□□ -1.22
TRAFD1-207ENST00000550051 OR2A4O95047 310 aa7.46□□□□□ -1.22
TRAFD1-207ENST00000550051 CNIH1O95406 144 aa7.46□□□□□ -1.22
TRAFD1-207ENST00000550051 CEACAM6P40199 344 aa7.46□□□□□ -1.22
TRAFD1-207ENST00000550051 LGALS7P47929 136 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms