RNA–Protein interactions for RNA: ENST00000548817.1

TROAP-208, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 480 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-208ENST00000548817 YPEL2Q96QA6 119 aa6.54□□□□□ -1.36
TROAP-208ENST00000548817 TOLLIPQ9H0E2 274 aa6.54□□□□□ -1.36
TROAP-208ENST00000548817 CHMP1AQ9HD42 196 aaPredicted RBP6.54□□□□□ -1.36
TROAP-208ENST00000548817 STUB1Q9UNE7 303 aa6.54□□□□□ -1.36
TROAP-208ENST00000548817 TRBV5-5A0A0J9YX44 114 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 PNMA8CA0A1B0GUJ8 204 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 A0A1W2PPK0 400 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 RAB29O14966 203 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 PDCD6O75340 191 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 RBBP9O75884 186 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 GABARAPO95166 117 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 LY6G6CO95867 125 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 IGHV3-11P01762 117 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 PSMB9P28065 219 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 TPPP2P59282 170 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 TAS2R43P59537 309 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 GNMTQ14749 295 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 ACTBL2Q562R1 376 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 LY6G6FQ5SQ64 297 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 ASPHD1Q5U4P2 390 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 FAM71F2Q6NXP2 309 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 UNQ5815/PRO19632Q6UWF5 114 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 FAM131AQ6UXB0 335 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 Q6ZNX1 250 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 ZNF833PQ6ZTB9 187 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 PPP1R27Q86WC6 154 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 LYPD6Q86Y78 171 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 GAPTQ8N292 157 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 OR13C5Q8NGS8 318 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 SETD6Q8TBK2 473 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 IL1F10Q8WWZ1 152 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 TMEM80Q96HE8 168 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 RITA1Q96K30 269 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 MS4A10Q96PG2 267 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 RSRP1Q9BUV0 290 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 FUNDC2Q9BWH2 189 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 ALX4Q9H161 411 aaPredicted RBP6.53□□□□□ -1.36
TROAP-208ENST00000548817 FBXL15Q9H469 300 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 SLA2Q9H6Q3 261 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 ZNF355PQ9NSJ1 428 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 PIPOXQ9P0Z9 390 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 GHRLQ9UBU3 117 aa6.53□□□□□ -1.36
TROAP-208ENST00000548817 MUC4Q99102 2169 aa6.52□□□□□ -1.36
TROAP-208ENST00000548817 KMT2AQ03164 3969 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 TRAV8-7A0A075B6U6 113 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 IGHV4OR15-8A0A075B7B6 117 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 A0A087WW49 117 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 SAA2-SAA4A0A096LPE2 208 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 C13orf42A0A1B0GVH6 325 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 OR5H14A6NHG9 310 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 RRHO14718 337 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 SC5DO75845 299 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 NDUFA3O95167 84 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 HNRNPCP07910 306 aaKnown RBP eCLIP6.52□□□□□ -1.37
TROAP-208ENST00000548817 UBBP0CG47 229 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 SAA2P0DJI9 122 aaPredicted RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 MED14OSP0DP75 135 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 FSTP19883 344 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 ZP3P21754 424 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 MAPK3P27361 379 aaPredicted RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 RANBP1P43487 201 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 CX3CL1P78423 397 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 TBCEQ15813 527 aaPredicted RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 SMN1Q16637 294 aaKnown RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 AKIRIN2Q53H80 203 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 UBE2UQ5VVX9 321 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 DMKNQ6E0U4 476 aaPredicted RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 NKAIN3Q8N8D7 197 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 ZFP41Q8N8Y5 198 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 MRPL30Q8TCC3 161 aaKnown RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 CASTOR1Q8WTX7 329 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 APH1BQ8WW43 257 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 FAM46BQ96A09 425 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 Q96M66 194 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 OR14A2Q96R54 314 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 CLCC1Q96S66 551 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 RNF5Q99942 180 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 UQCC2Q9BRT2 126 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 TUBA4BQ9H853 241 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 MBNL3Q9NUK0 354 aaKnown RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 C19orf73Q9NVV2 129 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 CNOT2Q9NZN8 540 aaKnown RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 SLC23A1Q9UHI7 598 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 DIMT1Q9UNQ2 313 aaKnown RBP6.52□□□□□ -1.37
TROAP-208ENST00000548817 WASHC3Q9Y3C0 194 aa6.52□□□□□ -1.37
TROAP-208ENST00000548817 TRBV5-7A0A0A0MS05 114 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 A0A0G2JLM5 398 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 H0Y980 276 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 ST8SIA5O15466 376 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 HSPA12AO43301 675 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 WBP4O75554 376 aaKnown RBP6.51□□□□□ -1.37
TROAP-208ENST00000548817 CNIH1O95406 144 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 TRGV3P03979 118 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 IGHV4-30-4P0DP06 118 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 ARSBP15848 533 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 CPEP16870 476 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 ZNF182P17025 639 aaPredicted RBP6.51□□□□□ -1.37
TROAP-208ENST00000548817 S100A5P33763 92 aa6.51□□□□□ -1.37
TROAP-208ENST00000548817 CRIP2P52943 208 aaPredicted RBP6.51□□□□□ -1.37
TROAP-208ENST00000548817 RPS16P62249 146 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms