RNA–Protein interactions for RNA: ENST00000544622.4

YBX3-216, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-216ENST00000544622 FAM131AQ6UXB0 335 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 GLDNQ6ZMI3 551 aaPredicted RBP8.98□□□□□ -0.97
YBX3-216ENST00000544622 FOXRED2Q8IWF2 684 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 RNF152Q8N8N0 203 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 ZNF383Q8NA42 475 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.98□□□□□ -0.97
YBX3-216ENST00000544622 OR4F17Q8NGA8 305 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 OR13F1Q8NGS4 319 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 OR10J5Q8NHC4 309 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 PHF21AQ96BD5 680 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 R3HDM4Q96D70 268 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 OR4F4Q96R69 305 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 ZNF107Q9UII5 783 aaPredicted RBP8.98□□□□□ -0.97
YBX3-216ENST00000544622 RNF150Q9ULK6 438 aa8.98□□□□□ -0.97
YBX3-216ENST00000544622 NOTCH3Q9UM47 2321 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 A0A0A6YYH2 397 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 IGHV7-81A0A0B4J1V7 117 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 TCRBV4S1A1TA0A5B7 111 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 TMEM235A6NFC5 223 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 A6NJ64 397 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 BET1O15155 118 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 NBR2O15453 112 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 HLA-DRB1P01911 266 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 IGKV1-16P04430 117 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 SMIM18P0DKX4 95 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 PPIFP30405 207 aaKnown RBP8.97□□□□□ -0.97
YBX3-216ENST00000544622 TALDO1P37837 337 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 PITPNAQ00169 270 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 DEFA6Q01524 100 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 ARFRP1Q13795 201 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 C5orf64Q2M2E5 130 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 SAMD5Q5TGI4 173 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 CROCCP3Q8IVE0 287 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 H1FOOQ8IZA3 346 aaPredicted RBP8.97□□□□□ -0.97
YBX3-216ENST00000544622 COMMD1Q8N668 190 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 DRAXINQ8NBI3 349 aaPredicted RBP8.97□□□□□ -0.97
YBX3-216ENST00000544622 C5orf30Q96GV9 206 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 FUNDC2Q9BWH2 189 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 GON7Q9BXV9 100 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 VCX3AQ9NNX9 186 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 SDHAF2Q9NX18 166 aa8.97□□□□□ -0.97
YBX3-216ENST00000544622 WIPF1O43516 503 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 RBBP9O75884 186 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 IGLV2-14P01704 120 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 IGHG4P01861 327 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 TFAP2AP05549 437 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 OR8U9P0C7N5 309 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 CRIP2P52943 208 aaPredicted RBP8.96□□□□□ -0.98
YBX3-216ENST00000544622 RPL23AP62750 156 aaKnown RBP8.96□□□□□ -0.98
YBX3-216ENST00000544622 KPRPQ5T749 579 aaPredicted RBP8.96□□□□□ -0.98
YBX3-216ENST00000544622 LIN54Q6MZP7 749 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 TEX38Q6PEX7 206 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 OR8U1Q8NH10 309 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 NUDCD2Q8WVJ2 157 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 SLC25A46Q96AG3 418 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 ST6GALNAC5Q9BVH7 336 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 ZFP57Q9NU63 452 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 ZNF221Q9UK13 617 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 WASHC3Q9Y3C0 194 aa8.96□□□□□ -0.98
YBX3-216ENST00000544622 PLXNB1O43157 2135 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 A0A1W2PRX2 142 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 G3V4G9 280 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 FCN1O00602 326 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 RRHO14718 337 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 HLA-DQB1P01920 261 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 ELANEP08246 267 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 CTXN2P0C2S0 81 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 PSMB8P28062 276 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 SLC6A1P30531 599 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 LSM3P62310 102 aaKnown RBP8.95□□□□□ -0.98
YBX3-216ENST00000544622 SLC35B1P78383 322 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 KIAA0141Q14154 515 aaPredicted RBP8.95□□□□□ -0.98
YBX3-216ENST00000544622 BEAN1Q3B7T3 259 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 C19orf54Q5BKX5 351 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 CNIH2Q6PI25 160 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 PDPNQ86YL7 162 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 MYOZ3Q8TDC0 251 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 DDB2Q92466 427 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 OR2D2Q9H210 308 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 OR51J1Q9H342 316 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 AUNIPQ9H7T9 357 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 ANXA10Q9UJ72 324 aa8.95□□□□□ -0.98
YBX3-216ENST00000544622 TRAV18A0A075B6X5 111 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 XRCC3O43542 346 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 RRP9O43818 475 aaKnown RBP8.94□□□□□ -0.98
YBX3-216ENST00000544622 TUSC2O75896 110 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 IGLV1-40P01703 118 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 EGR2P11161 476 aaPredicted RBP8.94□□□□□ -0.98
YBX3-216ENST00000544622 CDX1P47902 265 aaPredicted RBP8.94□□□□□ -0.98
YBX3-216ENST00000544622 GNG2P59768 71 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 NCS1P62166 190 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 CX3CL1P78423 397 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 NDPQ00604 133 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 FOXE3Q13461 319 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 PSG5Q15238 335 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 CTF1Q16619 201 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 ZNF660Q6AZW8 331 aaPredicted RBP8.94□□□□□ -0.98
YBX3-216ENST00000544622 ETV3LQ6ZN32 361 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 C18orf65Q6ZTR6 163 aa8.94□□□□□ -0.98
YBX3-216ENST00000544622 HOGA1Q86XE5 327 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms