RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 GABARAPO95166 117 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 IGLV2-14P01704 120 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 IGKV1-16P04430 117 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 EIF4EP06730 217 aaKnown RBP7.67□□□□□ -1.18
YBX3-212ENST00000542002 NFYAP23511 347 aaPredicted RBP7.67□□□□□ -1.18
YBX3-212ENST00000542002 GPR12P47775 334 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 GNG2P59768 71 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 ARL6IP1Q15041 203 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 NSUN5P1Q3KNT7 163 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 ARSJQ5FYB0 599 aaPredicted RBP7.67□□□□□ -1.18
YBX3-212ENST00000542002 FAM71F2Q6NXP2 309 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 FAM131AQ6UXB0 335 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 CROCCP3Q8IVE0 287 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 SAMD12Q8N8I0 201 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 NPBQ8NG41 125 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 EDARADDQ8WWZ3 215 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 DCSTAMPQ9H295 470 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 GHITMQ9H3K2 345 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 LIN7CQ9NUP9 197 aaKnown RBP7.67□□□□□ -1.18
YBX3-212ENST00000542002 SDHAF2Q9NX18 166 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 COMMD3Q9UBI1 195 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 GAB2Q9UQC2 676 aa7.67□□□□□ -1.18
YBX3-212ENST00000542002 A0A0A6YYH2 397 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 IGKV1D-13A0A0B4J2D9 117 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 MEIS3P1A6NDR6 274 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 A6NJ64 397 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 PEX14O75381 377 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 SCGNO76038 276 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 DIRAS3O95661 229 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 HLA-DQB1P01920 261 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 CSF1P09603 554 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 IGKV1-13P0DP09 117 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 PITPNAQ00169 270 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 SPCS2Q15005 226 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 MMDQ15546 238 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 UBE2NLQ5JXB2 153 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 SLC35E3Q7Z769 313 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 HOGA1Q86XE5 327 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 OR8H1Q8NGG4 311 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 SNAPC3Q92966 411 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 PHF21AQ96BD5 680 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 S100A16Q96FQ6 103 aaKnown RBP7.66□□□□□ -1.18
YBX3-212ENST00000542002 RASL11BQ9BPW5 248 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 OR2D2Q9H210 308 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 DIABLOQ9NR28 239 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 ANXA10Q9UJ72 324 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 ZNF221Q9UK13 617 aa7.66□□□□□ -1.18
YBX3-212ENST00000542002 A0A1W2PRX2 142 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 PSMB11A5LHX3 300 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 SRRM4A7MD48 611 aaKnown RBP7.65□□□□□ -1.18
YBX3-212ENST00000542002 M0R1X1 148 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 NBR2O15453 112 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 HPGDSO60760 199 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 NDUFA3O95167 84 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 EGR2P11161 476 aaPredicted RBP7.65□□□□□ -1.18
YBX3-212ENST00000542002 ELK1P19419 428 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 MC5RP33032 325 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 SOX6P35712 828 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 RORCP51449 518 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 TAS2R20P59543 309 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 CFHR3Q02985 330 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 C5orf64Q2M2E5 130 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 CNIH2Q6PI25 160 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 C18orf65Q6ZTR6 163 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 GPR141Q7Z602 305 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 NDUFA11Q86Y39 141 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 STPG2Q8N412 459 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 GINS4Q9BRT9 223 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 MMP27Q9H306 513 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 FBXL15Q9H469 300 aa7.65□□□□□ -1.18
YBX3-212ENST00000542002 IGHV7-81A0A0B4J1V7 117 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 TCRBV4S1A1TA0A5B7 111 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 OR5H14A6NHG9 310 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 LINC00473A8K010 186 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 G3V318 75 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 H7C2Y5 167 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 TUSC2O75896 110 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 IGLV2-23P01705 113 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 BRWD1-AS2P59051 145 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 RPL30P62888 115 aaKnown RBP7.64□□□□□ -1.19
YBX3-212ENST00000542002 EIF4EBP1Q13541 118 aaPredicted RBP7.64□□□□□ -1.19
YBX3-212ENST00000542002 PSG5Q15238 335 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 C2orf68Q2NKX9 166 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 LIN54Q6MZP7 749 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 LCNL1Q6ZST4 164 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 LYSMD2Q8IV50 215 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.64□□□□□ -1.19
YBX3-212ENST00000542002 BEST4Q8NFU0 473 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 CHPT1Q8WUD6 406 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 DDB2Q92466 427 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 GPHA2Q96T91 129 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 WASHC3Q9Y3C0 194 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 FBXO7Q9Y3I1 522 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 OR2W1Q9Y3N9 320 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 MGAM2Q2M2H8 2515 aa7.64□□□□□ -1.19
YBX3-212ENST00000542002 MEGF8Q7Z7M0 2845 aa7.63□□□□□ -1.19
YBX3-212ENST00000542002 AP4M1O00189 453 aa7.63□□□□□ -1.19
YBX3-212ENST00000542002 RRHO14718 337 aa7.63□□□□□ -1.19
YBX3-212ENST00000542002 HLA-DRB1P01911 266 aa7.63□□□□□ -1.19
YBX3-212ENST00000542002 APOA1P02647 267 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms