RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 FLNAP21333 2647 aaKnown RBP22.77■■□□□ 1.24
CCM2-218ENST00000541586 C13orf42A0A1B0GVH6 325 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 HOXB5P09067 269 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 ERVFRD-1P60508 538 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 HEPN1Q6WQI6 88 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 ZBTB34Q8NCN2 500 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 OR10A7Q8NGE5 316 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 LHFPL5Q8TAF8 219 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 C18orf12Q96KH6 178 aa22.77■■□□□ 1.23
CCM2-218ENST00000541586 C5orf51A6NDU8 294 aa22.76■■□□□ 1.23
CCM2-218ENST00000541586 H0Y980 276 aa22.76■■□□□ 1.23
CCM2-218ENST00000541586 MSMO1Q15800 293 aa22.76■■□□□ 1.23
CCM2-218ENST00000541586 GSG1LQ6UXU4 331 aa22.76■■□□□ 1.23
CCM2-218ENST00000541586 LGI3Q8N145 548 aa22.76■■□□□ 1.23
CCM2-218ENST00000541586 MPTX1A8MV57 137 aa22.75■■□□□ 1.23
CCM2-218ENST00000541586 B4DSR2 109 aa22.75■■□□□ 1.23
CCM2-218ENST00000541586 IGHV4-31P0DP07 118 aa22.75■■□□□ 1.23
CCM2-218ENST00000541586 CD99P14209 185 aa22.75■■□□□ 1.23
CCM2-218ENST00000541586 SVEP1Q4LDE5 3571 aa22.75■■□□□ 1.23
CCM2-218ENST00000541586 YLPM1P49750 1951 aaKnown RBP22.75■■□□□ 1.23
CCM2-218ENST00000541586 ITGB1BP1O14713 200 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 SLC31A2O15432 143 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 FOXH1O75593 365 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 UCP1P25874 307 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 DLX6P56179 175 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 EIF4EBP1Q13541 118 aaPredicted RBP22.74■■□□□ 1.23
CCM2-218ENST00000541586 LINC01356Q8N9X3 169 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 OR11H4Q8NGC9 324 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 ABHD14AQ9BUJ0 271 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 SDHAF2Q9NX18 166 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 ACANP16112 2415 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 TGFAP01135 160 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 SRPXP78539 464 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 CT45A1Q5HYN5 189 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 CT45A3Q8NHU0 189 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 HYLS1Q96M11 299 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 TMEM56Q96MV1 263 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 IFI27L2Q9H2X8 130 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 TMEM56-RWDD3S4R434 201 aa22.74■■□□□ 1.23
CCM2-218ENST00000541586 LOC105371242A0A075B767 164 aa22.73■■□□□ 1.23
CCM2-218ENST00000541586 GPR12P47775 334 aa22.73■■□□□ 1.23
CCM2-218ENST00000541586 CYB5R2Q6BCY4 276 aa22.73■■□□□ 1.23
CCM2-218ENST00000541586 LYZL2Q7Z4W2 148 aa22.73■■□□□ 1.23
CCM2-218ENST00000541586 ZNF439Q8NDP4 499 aa22.73■■□□□ 1.23
CCM2-218ENST00000541586 OR10C1Q96KK4 312 aa22.73■■□□□ 1.23
CCM2-218ENST00000541586 A0A1W2PPE3 182 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 KIAA1324LA8MWY0 1029 aaPredicted RBP22.72■■□□□ 1.23
CCM2-218ENST00000541586 B3GALNT1O75752 331 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 CDS2O95674 445 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 RAB7AP51149 207 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 Q3ZCU0 254 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 TMEM268Q5VZI3 342 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 GGNBP1Q5YKI7 109 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 BTNL3Q6UXE8 466 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 TMUB1Q9BVT8 246 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 MMP26Q9NRE1 261 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 ZANQ9Y493 2812 aa22.72■■□□□ 1.23
CCM2-218ENST00000541586 MSMBP08118 114 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 C8orf46Q8TAG6 207 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 SMR3AQ99954 134 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 LIN7CQ9NUP9 197 aaKnown RBP22.71■■□□□ 1.23
CCM2-218ENST00000541586 RNF212BA8MTL3 300 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 IFNA21P01568 189 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 ZNF16P17020 682 aaPredicted RBP22.71■■□□□ 1.23
CCM2-218ENST00000541586 GNG10P50151 68 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 ZNF695Q8IW36 515 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 SELENOHQ8IZQ5 122 aaKnown RBP22.71■■□□□ 1.23
CCM2-218ENST00000541586 SLC35G3Q8N808 338 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 C1orf159Q96HA4 380 aa22.71■■□□□ 1.23
CCM2-218ENST00000541586 ABCA1O95477 2261 aa22.7■■□□□ 1.23
CCM2-218ENST00000541586 C22orf46C9J442 243 aa22.7■■□□□ 1.22
CCM2-218ENST00000541586 RPL30P62888 115 aaKnown RBP22.7■■□□□ 1.22
CCM2-218ENST00000541586 C11orf42Q8N5U0 333 aa22.7■■□□□ 1.22
CCM2-218ENST00000541586 NMES1Q9C002 83 aa22.7■■□□□ 1.22
CCM2-218ENST00000541586 ABCA2Q9BZC7 2435 aa22.7■■□□□ 1.22
CCM2-218ENST00000541586 CSPG4Q6UVK1 2322 aa22.69■■□□□ 1.22
CCM2-218ENST00000541586 A8MXK9 166 aa22.69■■□□□ 1.22
CCM2-218ENST00000541586 PROP1O75360 226 aa22.69■■□□□ 1.22
CCM2-218ENST00000541586 SERPINE2P07093 398 aa22.69■■□□□ 1.22
CCM2-218ENST00000541586 CYCSP99999 105 aaKnown RBP22.69■■□□□ 1.22
CCM2-218ENST00000541586 C2orf50Q96LR7 162 aa22.69■■□□□ 1.22
CCM2-218ENST00000541586 HIF1ANQ9NWT6 349 aa22.69■■□□□ 1.22
CCM2-218ENST00000541586 PPIAL4CA0A0B4J2A2 164 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 C17orf98A8MV24 154 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 PPIAL4GP0DN37 164 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 ZNF66Q6ZN08 573 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 SLC25A48Q6ZT89 311 aaKnown RBP22.68■■□□□ 1.22
CCM2-218ENST00000541586 GRPEL2Q8TAA5 225 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 PPP1R1CQ8WVI7 109 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 RBPMSQ93062 196 aaKnown RBP22.68■■□□□ 1.22
CCM2-218ENST00000541586 IAH1Q2TAA2 248 aaPredicted RBP22.68■■□□□ 1.22
CCM2-218ENST00000541586 RPL39P5Q59GN2 51 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 LY6G5BQ8NDX9 201 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 IL22RA2Q969J5 263 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 TMEM186Q96B77 213 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 TMED3Q9Y3Q3 217 aa22.68■■□□□ 1.22
CCM2-218ENST00000541586 MAST4O15021 2626 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 TRAV14DV4A0A0A6YYC5 116 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 IGHV1-8P0DP01 117 aa22.67■■□□□ 1.22
CCM2-218ENST00000541586 CATR1Q13166 79 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms