RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	KCNK7	Q9Y2U2	307 aa		10.19	□□□□□ -0.78
SEMA4D-223	ENST00000540475	FBXO7	Q9Y3I1	522 aa		10.19	□□□□□ -0.78
SEMA4D-223	ENST00000540475	WSB1	Q9Y6I7	421 aa		10.19	□□□□□ -0.78
SEMA4D-223	ENST00000540475		V9GY05	133 aa		10.19	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SORL1	Q92673	2214 aa		10.19	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TENM3	Q9P273	2699 aa		10.19	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SOX15	O60248	233 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	DIRAS3	O95661	229 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	MAP2K4	P45985	399 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	VEGFC	P49767	419 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	CX3CL1	P78423	397 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	NDP	Q00604	133 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SSX1	Q16384	188 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	OR56B1	Q8NGI3	324 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	VCX3B	Q9H321	246 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TPSG1	Q9NRR2	321 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	OR1A1	Q9P1Q5	309 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	RAB22A	Q9UL26	194 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	WASHC3	Q9Y3C0	194 aa		10.18	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TMEM272	A0A1B0GTI8	110 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TRDC	B7Z8K6	153 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	FCN1	O00602	326 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	DENR	O43583	198 aa	Known RBP	10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	OR8U8	P0C7N1	319 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	GAL	P22466	123 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SERPINB10	P48595	397 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	HSPA13	P48723	471 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	INSL3	P51460	131 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	CLDN12	P56749	244 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SRSF7	Q16629	238 aa	Known RBP eCLIP	10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	AKIRIN2	Q53H80	203 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TMEM65	Q6PI78	240 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	ZNF562	Q6V9R5	426 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	ZNF367	Q7RTV3	350 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	OR1N2	Q8NGR9	330 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SETD6	Q8TBK2	473 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	CMSS1	Q9BQ75	279 aa	Known RBP	10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	CCDC90B	Q9GZT6	254 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	PARP11	Q9NR21	331 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	RYR3	Q15413	4870 aa		10.17	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TRDV1	A0A1B0GX56	115 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SHISA3	A0PJX4	238 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SEC14L6	B5MCN3	397 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	MRPS14	O60783	128 aa	Known RBP	10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	SPDEF	O95238	335 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	RAB25	P57735	213 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	GNB1	P62873	340 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	ZNF616	Q08AN1	781 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	PLA2G7	Q13093	441 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	PSG5	Q15238	335 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	C11orf87	Q6NUJ2	197 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	GLDN	Q6ZMI3	551 aa	Predicted RBP	10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475		Q6ZS49	121 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	ZNF383	Q8NA42	475 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	OR4A4P	Q8NGN8	299 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	FBXL15	Q9H469	300 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	NDUFB11	Q9NX14	153 aa		10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	FOXA2	Q9Y261	457 aa	Predicted RBP	10.16	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TRBV6-7	A0A0A0MS04	114 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	ERICH4	A6NGS2	130 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	IFITM5	A6NNB3	132 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	RAB27B	O00194	218 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	MFNG	O00587	321 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	PDCD5	O14737	125 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	HSPA12A	O43301	675 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	IGKV1-16	P04430	117 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	GSTP1	P09211	210 aa	Known RBP	10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	NHLRC4	P0CG21	123 aa	Predicted RBP	10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	RAB6A	P20340	208 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	CD69	Q07108	199 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	TMEM267	Q0VDI3	215 aa	Predicted RBP	10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	MOGAT2	Q3SYC2	334 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	PYHIN1	Q6K0P9	492 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	IZUMO2	Q6UXV1	221 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	PDPN	Q86YL7	162 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	CABLES2	Q9BTV7	478 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	RDH8	Q9NYR8	311 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	BLOC1S6	Q9UL45	172 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475	RAB26	Q9ULW5	256 aa		10.15	□□□□□ -0.78
SEMA4D-223	ENST00000540475		H7C2Y5	167 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	BRI3	O95415	125 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	TFAP2A	P05549	437 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	CRYGB	P07316	175 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	LINC00205	P59089	165 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	GABARAPL2	P60520	117 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	HES5	Q5TA89	166 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	OR10R2	Q8NGX6	335 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	RAB3C	Q96E17	227 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	TSNAX	Q99598	290 aa	Known RBP	10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	ZNF221	Q9UK13	617 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	RNF150	Q9ULK6	438 aa		10.14	□□□□□ -0.79
SEMA4D-223	ENST00000540475	TNC	P24821	2201 aa		10.13	□□□□□ -0.79
SEMA4D-223	ENST00000540475		A0A1W2PN81	502 aa		10.13	□□□□□ -0.79
SEMA4D-223	ENST00000540475	FABP7	O15540	132 aa		10.13	□□□□□ -0.79
SEMA4D-223	ENST00000540475	IGLV2-23	P01705	113 aa		10.13	□□□□□ -0.79
SEMA4D-223	ENST00000540475	FCGR3A	P08637	254 aa		10.13	□□□□□ -0.79
SEMA4D-223	ENST00000540475	LGALS1	P09382	135 aa	Known RBP	10.13	□□□□□ -0.79
SEMA4D-223	ENST00000540475	GSTT2	P0CG29	244 aa		10.13	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 57 ms