RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 ZNF383Q8NA42 475 aa11.86□□□□□ -0.51
UBE3B-212ENST00000540230 OR5AN1Q8NGI8 311 aa11.86□□□□□ -0.51
UBE3B-212ENST00000540230 OR8U1Q8NH10 309 aa11.86□□□□□ -0.51
UBE3B-212ENST00000540230 OR10J5Q8NHC4 309 aa11.86□□□□□ -0.51
UBE3B-212ENST00000540230 CHPT1Q8WUD6 406 aa11.86□□□□□ -0.51
UBE3B-212ENST00000540230 ST6GALNAC5Q9BVH7 336 aa11.86□□□□□ -0.51
UBE3B-212ENST00000540230 OR2D2Q9H210 308 aa11.86□□□□□ -0.51
UBE3B-212ENST00000540230 ZNF107Q9UII5 783 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-212ENST00000540230 TSSC4Q9Y5U2 329 aaPredicted RBP11.86□□□□□ -0.51
UBE3B-212ENST00000540230 OR5H14A6NHG9 310 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 AP4M1O00189 453 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 NBR2O15453 112 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 NDUFA3O95167 84 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 PTHLHP12272 177 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 SOX6P35712 828 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 DEFA6Q01524 100 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 ARL6IP1Q15041 203 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 LCNL1Q6ZST4 164 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 NPBQ8NG41 125 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 OR13F1Q8NGS4 319 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 PHF21AQ96BD5 680 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 GHITMQ9H3K2 345 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 ZNF221Q9UK13 617 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 SPATA2Q9UM82 520 aa11.85□□□□□ -0.51
UBE3B-212ENST00000540230 TRAV18A0A075B6X5 111 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 G3V4G9 280 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 WIPF1O43516 503 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 SCGNO76038 276 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 DIRAS3O95661 229 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 IGKV1-16P04430 117 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 GNG2P59768 71 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 VBP1P61758 197 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 C5orf64Q2M2E5 130 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 H1FOOQ8IZA3 346 aaPredicted RBP11.84□□□□□ -0.51
UBE3B-212ENST00000540230 OR4F17Q8NGA8 305 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 OR4F4Q96R69 305 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 NAA50Q9GZZ1 169 aaKnown RBP11.84□□□□□ -0.51
UBE3B-212ENST00000540230 FBXL15Q9H469 300 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 SDHAF2Q9NX18 166 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 WASHC3Q9Y3C0 194 aa11.84□□□□□ -0.51
UBE3B-212ENST00000540230 IGHV7-81A0A0B4J1V7 117 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 H7C2Y5 167 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 J3QRK9 145 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 M0R1X1 148 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 RRP9O43818 475 aaKnown RBP11.83□□□□□ -0.52
UBE3B-212ENST00000540230 TFAP2AP05549 437 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 NDPQ00604 133 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 CFHR3Q02985 330 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 PNLIPRP3Q17RR3 467 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 GVQW1Q8N7I0 195 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 GINS4Q9BRT9 223 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 NOTCH3Q9UM47 2321 aa11.83□□□□□ -0.52
UBE3B-212ENST00000540230 ATP6V0E1O15342 81 aa11.82□□□□□ -0.52
UBE3B-212ENST00000540230 HLA-DRB1P01911 266 aa11.82□□□□□ -0.52
UBE3B-212ENST00000540230 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.82□□□□□ -0.52
UBE3B-212ENST00000540230 DCSTAMPQ9H295 470 aa11.82□□□□□ -0.52
UBE3B-212ENST00000540230 FBXO7Q9Y3I1 522 aa11.82□□□□□ -0.52
UBE3B-212ENST00000540230 G3V318 75 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 FCN1O00602 326 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 RRHO14718 337 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 IGF1P05019 195 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 FCER2P06734 321 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 PF4V1P10720 104 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 NFYAP23511 347 aaPredicted RBP11.81□□□□□ -0.52
UBE3B-212ENST00000540230 MC5RP33032 325 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 RPL23AP62750 156 aaKnown RBP11.81□□□□□ -0.52
UBE3B-212ENST00000540230 SLC35B1P78383 322 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 PITPNAQ00169 270 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 SAMD5Q5TGI4 173 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 ETV3LQ6ZN32 361 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 SLC25A46Q96AG3 418 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 OR51J1Q9H342 316 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 AUNIPQ9H7T9 357 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 TPSG1Q9NRR2 321 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 KIAA1456Q9P272 454 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 GAB2Q9UQC2 676 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 A0A0A6YYH2 397 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 A6NJ64 397 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 RPLP1P05386 114 aaKnown RBP11.81□□□□□ -0.52
UBE3B-212ENST00000540230 OXLD1Q5BKU9 147 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 LIN54Q6MZP7 749 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 CROCCP3Q8IVE0 287 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 PARP11Q9NR21 331 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 SLC35D1Q9NTN3 355 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 ANXA10Q9UJ72 324 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 RBM7Q9Y580 266 aaKnown RBP11.81□□□□□ -0.52
UBE3B-212ENST00000540230 WSB1Q9Y6I7 421 aa11.81□□□□□ -0.52
UBE3B-212ENST00000540230 IGKV1D-13A0A0B4J2D9 117 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 MEIS3P1A6NDR6 274 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 TMEM127O75204 238 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 IGKV1-13P0DP09 117 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 VDAC1P21796 283 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 PSG5Q15238 335 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 UBE2NLQ5JXB2 153 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 TEX38Q6PEX7 206 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 CNIH2Q6PI25 160 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 C8orf86Q6ZUL3 223 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 PDPNQ86YL7 162 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 COMMD1Q8N668 190 aa11.8□□□□□ -0.52
UBE3B-212ENST00000540230 SAMD12Q8N8I0 201 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms