RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 AMELYQ99218 206 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 SDHCQ99643 169 aaPredicted RBP2.98□□□□□ -1.93
PTPN22-211ENST00000538253 RNF5Q99942 180 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 NICN1Q9BSH3 213 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 MMP26Q9NRE1 261 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 RPUSD1Q9UJJ7 312 aaKnown RBP2.98□□□□□ -1.93
PTPN22-211ENST00000538253 JPT1Q9UK76 154 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 HIVEP3Q5T1R4 2406 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 COLCA2A8K830 154 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 M0R129 80 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 GABARAPO95166 117 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 APOA2P02652 100 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 TK1P04183 234 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 MAS1P04201 325 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 UBE2E1P51965 193 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 EDDM3BP56851 147 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 OR2B8PP59922 312 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 ERVK11-1P61568 191 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 CATR1Q13166 79 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 MEF2DQ14814 521 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 LGALSLQ3ZCW2 172 aaPredicted RBP2.98□□□□□ -1.93
PTPN22-211ENST00000538253 SAMD13Q5VXD3 122 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 Q6ZTK2 550 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 C9orf139Q6ZV77 190 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 C11orf42Q8N5U0 333 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 CCDC71LQ8N9Z2 235 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 DEFB108BQ8NET1 73 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 TERB2Q8NHR7 220 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 SSMEM1Q8WWF3 244 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 PPP1R14AQ96A00 147 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 GALMQ96C23 342 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 ASCL2Q99929 193 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 PDCD1LG2Q9BQ51 273 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 CLEC7AQ9BXN2 247 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 SELENOIQ9C0D9 397 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 GAR1Q9NY12 217 aaKnown RBP2.98□□□□□ -1.93
PTPN22-211ENST00000538253 PIPOXQ9P0Z9 390 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 TSSC4Q9Y5U2 329 aaPredicted RBP2.98□□□□□ -1.93
PTPN22-211ENST00000538253 CACNA1CQ13936 2221 aa2.98□□□□□ -1.93
PTPN22-211ENST00000538253 MEIKINA0A087WXM9 373 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ODAMA1E959 279 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 IFITM5A6NNB3 132 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 DVL1O14640 695 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR5H8P0DN80 308 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 PSG2P11465 335 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ANOS1P23352 680 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 COL8A2P25067 703 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ACKR3P25106 362 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CD34P28906 385 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HCCSP53701 268 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ATP5IP56385 69 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ZP1P60852 638 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HERV-K104P61576 105 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SMN1Q16637 294 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HAGHQ16775 308 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ODF4Q2M2E3 257 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CR1LQ2VPA4 569 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 Q6ZR03 302 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 BCDIN3DQ7Z5W3 292 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF664Q8N3J9 261 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR11H4Q8NGC9 324 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR51S1Q8NGJ8 323 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OR4A4PQ8NGN8 299 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HPSE2Q8WWQ2 592 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 MALSU1Q96EH3 234 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ADAT3Q96EY9 351 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 KIRREL1Q96J84 757 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 LYZL4Q96KX0 146 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 PGLYRP3Q96LB9 341 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 TTTY10Q9BZA0 68 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 C20orf85Q9H1P6 137 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ARV1Q9H2C2 271 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 AUNIPQ9H7T9 357 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 IDI2-AS1Q9NZ38 188 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 GNG12Q9UBI6 72 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 RFNGQ9Y644 331 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 SPTBN1Q01082 2364 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 IGHV4-30-2A0A087WSY4 118 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 F2RL2O00254 374 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 PHOX2AO14813 284 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ST8SIA3O43173 380 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 WIPF1O43516 503 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 FBXO24O75426 580 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 YIF1AO95070 293 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CLIC3O95833 236 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 GAPDHP04406 335 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 IGHV4-31P0DP07 118 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 CD37P11049 281 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 HTR1DP28221 377 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 BLVRBP30043 206 aaPredicted RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 GP2P55259 537 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 NANOS3P60323 173 aaKnown RBP2.97□□□□□ -1.93
PTPN22-211ENST00000538253 LMO4P61968 165 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 COL10A1Q03692 680 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 AESQ08117 197 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 UBE2V2Q15819 145 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 OCIAD2Q56VL3 154 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 LYPD4Q6UWN0 246 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 TREML4Q6UXN2 200 aa2.97□□□□□ -1.93
PTPN22-211ENST00000538253 ZNF562Q6V9R5 426 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms