RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 EIF4EBP1Q13541 118 aaPredicted RBP12.01□□□□□ -0.49
USP44-203ENST00000537435 SLC35E4Q6ICL7 350 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 INO80CQ6PI98 192 aaPredicted RBP12.01□□□□□ -0.49
USP44-203ENST00000537435 SPNS3Q6ZMD2 512 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 MRGPRDQ8TDS7 321 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 FAM210BQ96KR6 192 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 CLCF1Q9UBD9 225 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 NCOR1O75376 2440 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 LRRC30A6NM36 301 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 P0C879 139 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 GABRA2P47869 451 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 RND2P52198 227 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 BTNL3Q6UXE8 466 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 C1orf87Q8N0U7 546 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 NINJ1Q92982 152 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 COQ2Q96H96 371 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 TRIB1Q96RU8 372 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 GGACTQ9BVM4 153 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 TMEM242Q9NWH2 141 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 TIMM9Q9Y5J7 89 aa12.01□□□□□ -0.49
USP44-203ENST00000537435 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12□□□□□ -0.49
USP44-203ENST00000537435 C17orf98A8MV24 154 aa12□□□□□ -0.49
USP44-203ENST00000537435 C1QTNF9BB2RNN3 333 aa12□□□□□ -0.49
USP44-203ENST00000537435 AGFG2O95081 481 aa12□□□□□ -0.49
USP44-203ENST00000537435 S100PP25815 95 aa12□□□□□ -0.49
USP44-203ENST00000537435 BRWD1-AS2P59051 145 aa12□□□□□ -0.49
USP44-203ENST00000537435 PRAMEF6Q5VXH4 476 aa12□□□□□ -0.49
USP44-203ENST00000537435 ACSM6Q6P461 480 aa12□□□□□ -0.49
USP44-203ENST00000537435 Q6ZR03 302 aa12□□□□□ -0.49
USP44-203ENST00000537435 FAM214BQ7L5A3 538 aa12□□□□□ -0.49
USP44-203ENST00000537435 CTNNBIP1Q9NSA3 81 aaPredicted RBP12□□□□□ -0.49
USP44-203ENST00000537435 GTF3C1Q12789 2109 aa12□□□□□ -0.49
USP44-203ENST00000537435 HMGB3O15347 200 aaKnown RBP12□□□□□ -0.49
USP44-203ENST00000537435 ZG16O60844 167 aa12□□□□□ -0.49
USP44-203ENST00000537435 WDR25Q64LD2 544 aaPredicted RBP12□□□□□ -0.49
USP44-203ENST00000537435 ACP7Q6ZNF0 438 aa12□□□□□ -0.49
USP44-203ENST00000537435 Q6ZT83 130 aa12□□□□□ -0.49
USP44-203ENST00000537435 TPRX1Q8N7U7 411 aa12□□□□□ -0.49
USP44-203ENST00000537435 CNEP1R1Q8N9A8 125 aa12□□□□□ -0.49
USP44-203ENST00000537435 OR13D1Q8NGV5 346 aa12□□□□□ -0.49
USP44-203ENST00000537435 SLC25A22Q9H936 323 aa12□□□□□ -0.49
USP44-203ENST00000537435 UFSP2Q9NUQ7 469 aa12□□□□□ -0.49
USP44-203ENST00000537435 TNFSF10P50591 281 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 RPS16P62249 146 aaKnown RBP11.99□□□□□ -0.49
USP44-203ENST00000537435 CENPVQ7Z7K6 275 aaPredicted RBP11.99□□□□□ -0.49
USP44-203ENST00000537435 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 SSX3Q99909 188 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 TMEM147Q9BVK8 224 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 CXXC4Q9H2H0 198 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 PMS2P5A8MQ11 134 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 S100A2P29034 98 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 SSTR5P35346 364 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 SOX8P57073 446 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 CD81P60033 236 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 TLE1Q04724 770 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 ATP6V1FQ16864 119 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 DTD1Q8TEA8 209 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 GAR1Q9NY12 217 aaKnown RBP11.99□□□□□ -0.49
USP44-203ENST00000537435 METRNQ9UJH8 293 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 FZR1Q9UM11 496 aa11.99□□□□□ -0.49
USP44-203ENST00000537435 CHD3Q12873 2000 aaKnown RBP11.98□□□□□ -0.49
USP44-203ENST00000537435 IGHV3-43A0A0B4J1X8 118 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 OR5H1A6NKK0 313 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 WISP2O76076 250 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 PTBP3O95758 552 aaKnown RBP11.98□□□□□ -0.49
USP44-203ENST00000537435 TRGC1P0CF51 173 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 IGHV3-43DP0DP04 118 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 FGF7P21781 194 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 LINC00205P59089 165 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 NKX6-1P78426 367 aaPredicted RBP11.98□□□□□ -0.49
USP44-203ENST00000537435 PMS2P11Q13670 270 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 WDR82Q6UXN9 313 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 OR10P1Q8NGE3 313 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 EDARADDQ8WWZ3 215 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 LOXL4Q96JB6 756 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 DIDO1Q9BTC0 2240 aaKnown RBP11.98□□□□□ -0.49
USP44-203ENST00000537435 RAB29O14966 203 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 TIMM8AO60220 97 aaPredicted RBP11.98□□□□□ -0.49
USP44-203ENST00000537435 RBMXL2O75526 392 aaKnown RBP11.98□□□□□ -0.49
USP44-203ENST00000537435 IGKV3-15P01624 115 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 IGHV2-70P01814 119 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 HOXC12P31275 282 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 MEF2BQ02080 365 aaPredicted RBP11.98□□□□□ -0.49
USP44-203ENST00000537435 COL10A1Q03692 680 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 WDR31Q8NA23 367 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 OR13A1Q8NGR1 328 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 PRR7Q8TB68 274 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 ABHD5Q8WTS1 349 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 FRZBQ92765 325 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 SMIM7Q9BQ49 75 aa11.98□□□□□ -0.49
USP44-203ENST00000537435 TRAV20A0A0B4J274 112 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 CTXND1A0A1B0GTU2 59 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 SEC14L6B5MCN3 397 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 CLDN14O95500 239 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 TFF3Q07654 80 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 ADIRFQ15847 76 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 SPINK9Q5DT21 86 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 GFI1BQ5VTD9 330 aa11.97□□□□□ -0.49
USP44-203ENST00000537435 VWA1Q6PCB0 445 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms