RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, human

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-223	ENST00000532370	PHF21A	Q96BD5	680 aa		13.75	□□□□□ -0.21
CTSB-223	ENST00000532370	ZNF221	Q9UK13	617 aa		13.75	□□□□□ -0.21
CTSB-223	ENST00000532370	TCRBV4S1A1T	A0A5B7	111 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	PSMB11	A5LHX3	300 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	PNLIPRP3	Q17RR3	467 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	CROCCP3	Q8IVE0	287 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	ZNF383	Q8NA42	475 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	OR5AN1	Q8NGI8	311 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	C5orf30	Q96GV9	206 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	GINS4	Q9BRT9	223 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	OR2D2	Q9H210	308 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	DCSTAMP	Q9H295	470 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	GHITM	Q9H3K2	345 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370	SCOC	Q9UIL1	159 aa		13.74	□□□□□ -0.21
CTSB-223	ENST00000532370		J3QRK9	145 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370		M0R1X1	148 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	DIRAS3	O95661	229 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	FCER2	P06734	321 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	PITPNA	Q00169	270 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	H1FOO	Q8IZA3	346 aa	Predicted RBP	13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	STPG2	Q8N412	459 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	GVQW1	Q8N7I0	195 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	SAMD12	Q8N8I0	201 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	AUNIP	Q9H7T9	357 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	DIABLO	Q9NR28	239 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	SDHAF2	Q9NX18	166 aa		13.73	□□□□□ -0.21
CTSB-223	ENST00000532370	OR5H14	A6NHG9	310 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370		H7C2Y5	167 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	NBR2	O15453	112 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	TMEM127	O75204	238 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	GABARAP	O95166	117 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	IGKV1-16	P04430	117 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	SOX6	P35712	828 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	CTF1	Q16619	201 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	GPR107	Q5VW38	600 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	GPR141	Q7Z602	305 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	ANKRD13B	Q86YJ7	626 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	FOXRED2	Q8IWF2	684 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	NPB	Q8NG41	125 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	OR4X2	Q8NGF9	303 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	CHPT1	Q8WUD6	406 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	R3HDM4	Q96D70	268 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	ZNF107	Q9UII5	783 aa	Predicted RBP	13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	WASHC3	Q9Y3C0	194 aa		13.72	□□□□□ -0.21
CTSB-223	ENST00000532370	NOTCH1	P46531	2555 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370		A0A0A6YYH2	397 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370		A6NJ64	397 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	AP4M1	O00189	453 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	NFYA	P23511	347 aa	Predicted RBP	13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	MC5R	P33032	325 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	C5orf64	Q2M2E5	130 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	KHDC1L	Q5JSQ8	128 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	UBE2NL	Q5JXB2	153 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	ANXA10	Q9UJ72	324 aa		13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	RBM7	Q9Y580	266 aa	Known RBP	13.71	□□□□□ -0.21
CTSB-223	ENST00000532370	XRCC3	O43542	346 aa		13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	OPN1MW	P04001	364 aa		13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	OPN1MW2	P0DN77	364 aa		13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	OPN1MW3	P0DN78	364 aa		13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	CNIH2	Q6PI25	160 aa		13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	S100A16	Q96FQ6	103 aa	Known RBP	13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	FBXL15	Q9H469	300 aa		13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	COMMD3	Q9UBI1	195 aa		13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	TSSC4	Q9Y5U2	329 aa	Predicted RBP	13.7	□□□□□ -0.22
CTSB-223	ENST00000532370	TET2	Q6N021	2002 aa	Predicted RBP	13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	IGHV7-81	A0A0B4J1V7	117 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	MEIS3P1	A6NDR6	274 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	FCN1	O00602	326 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	KCNAB3	O43448	404 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	NDUFA3	O95167	84 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	EIF4E	P06730	217 aa	Known RBP	13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	CTXN2	P0C2S0	81 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	LIN54	Q6MZP7	749 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	LCNL1	Q6ZST4	164 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	C18orf65	Q6ZTR6	163 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	HOGA1	Q86XE5	327 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	KCTD12	Q96CX2	325 aa	Known RBP	13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	KIAA1456	Q9P272	454 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	GAB2	Q9UQC2	676 aa		13.69	□□□□□ -0.22
CTSB-223	ENST00000532370	IGKV1D-13	A0A0B4J2D9	117 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	RRH	O14718	337 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	HLA-DRB1	P01911	266 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	IGKV1-13	P0DP09	117 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	TAS2R20	P59543	309 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	RPS16	P62249	146 aa	Known RBP	13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	SLC35B1	P78383	322 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	TMEM69	Q5SWH9	247 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	C1QL4	Q86Z23	238 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	BEST4	Q8NFU0	473 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	OR4F17	Q8NGA8	305 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	SNAPC3	Q92966	411 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	OR4F4	Q96R69	305 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	BCL7B	Q9BQE9	202 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	OR2W1	Q9Y3N9	320 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370	WSB1	Q9Y6I7	421 aa		13.68	□□□□□ -0.22
CTSB-223	ENST00000532370		G3V318	75 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	RBBP9	O75884	186 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	HLA-DQB1	P01920	261 aa		13.67	□□□□□ -0.22
CTSB-223	ENST00000532370	APOA2	P02652	100 aa		13.67	□□□□□ -0.22

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